Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0255 ATGGACACGGACGGCGTCGTTTCATTCGATCATGTCTCGCCGGAGGATTCCCACGAAGTTCATGTCTTGGCCGTTGATGACAGCATCATTGATCGTAAGGTCATTGAGCGCTTGCTCAAAATCTCAGCTTGTAAAGTTACGGCTGTGGATAGTGGAATCAGAGCACTGCAATTTCTGGGGCTGGATAGAAGGACCTCTGAATCTGATGATGGTTTTGTCCCGGATTTGAAGGTGGATCTAATCATCACAGACTACTGCATGCCCGAAATGACCGGTTACGAGTTGCTCAAGAAAATCAAGGAATCGTCCACTTTCAGAGAAATTCCCGTAGTGATCATGTCTTCCGAAAACATTTTGCCGCGCATAGACAGATGTTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAATTATCTGACGTGAAAAGATTAAAGGGTTACATGACACCGAAAGAGGTTAAGGATAAATCCAGATGCTTAAACGGGAATCGTCATGAGTCAGTTACCTAA 516 0.4516 MDTDGVVSFDHVSPEDSHEVHVLAVDDSIIDRKVIERLLKISACKVTAVDSGIRALQFLGLDRRTSESDDGFVPDLKVDLIITDYCMPEMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTPKEVKDKSRCLNGNRHESVT 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0255 171 Pfam Response regulator receiver domain 22 143 IPR001789 GO:0000160
Aed11g0255 171 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 161 IPR045279 GO:0009736
Aed11g0255 171 Gene3D - 20 169 - -
Aed11g0255 171 ProSiteProfiles Response regulatory domain profile. 21 151 IPR001789 GO:0000160
Aed11g0255 171 SUPERFAMILY CheY-like 20 145 IPR011006 -
Aed11g0255 171 SMART REC_2 20 150 IPR001789 GO:0000160
Aed11g0255 171 CDD REC_typeA_ARR 22 146 - -
Aed11g0255 171 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 11 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0255 Aed-Chr11 2114474 2117976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0255 13 168 Response Regulator Gene Family AT1G10470 68.590 2.64e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed11g0255 Response_reg 4.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0255 K14492 - gmx:100779833 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0255 11 2114474 2117976 Aed11g0255 11 2114474 2117976 ECH
Aed11g0255 11 2114474 2117976 Aed7g1697 7 20331777 20333629 PCT