Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0244 ATGAGCTCATCCTCAGAGAAGAAACCTTCCTCTTCTTCATCTTTTCCTTCAGTGTTGAAGGTATTTGGTTTCCCTTTGAGTGCTACGAGCAGCGACGACGGTGACGGTGATGTCCAGAGTAAGAAAATCGAGTGTCCATATTGCCATCGCGAATTTCAGAATTTGCAAGCGCTTGGGGGACACCAAAATGCACATAGGAGAGAAAGACAAATGGCTAGGTTTGCCCAATTTGAATATATGCGTCTAAATCAAAGAAACCAAATGTTCCAATCGGTTGTGGTTGCACAATTAGGAGCAGCACCAACAACAACCCCTGTTTCCGGTGGTGCAACTCGGTTCAGGACAGCACTACCTGAGTCATCACAGCTACCTGTGGCGGAGCCACCAGGTACGGTTACCCCTGTTGTTGATCAAGTACCAGTAGTAGGGGTTGATGATAATATGGATCTAGAACTGAGACTAGGTAATTCTTCTAAGGAATCTGGGATGTGA 492 0.4593 MSSSSEKKPSSSSSFPSVLKVFGFPLSATSSDDGDGDVQSKKIECPYCHREFQNLQALGGHQNAHRRERQMARFAQFEYMRLNQRNQMFQSVVVAQLGAAPTTTPVSGGATRFRTALPESSQLPVAEPPGTVTPVVDQVPVVGVDDNMDLELRLGNSSKESGM 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0244 163 PANTHER ZINC FINGER PROTEIN 5 4 159 IPR044299 GO:0010090
Aed11g0244 163 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
Aed11g0244 163 Pfam C2H2-type zinc finger 44 68 - -
Aed11g0244 163 SUPERFAMILY beta-beta-alpha zinc fingers 40 71 IPR036236 -
Aed11g0244 163 Gene3D Classic Zinc Finger 30 98 - -
Aed11g0244 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 70 IPR013087 -
Aed11g0244 163 PANTHER ZINC FINGER PROTEIN 6-LIKE 4 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0244 Aed-Chr11 2052646 2053137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0244 17 90 C2H2 Transcription Factor Family AT1G67030 45.238 3.53e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0244 - - gmx:102669330 187.193