Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0224 ATGCCATTTGGTTTGGTCTCACTCTCAGCCTGGAACAAGCGCCGTAGAAGCAAATCTCAAGATCATACAGATCCCTGTATTGTCTTCTTTCTTTCTTTTCTCATTCATGGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAAACTCCACGACCTACAAAAAGGCTACATGGATCATCTGTTTACACACTCAAGGAGATGGAAGAGGCAACTTGTTCATTCAGTGATGAGAATCTGCTTGGTAAAGGAGGATTTGGCAAAGTCTACCGGGGCACTTTGCGGTCAGGAGAGATATCTGATTTTGGACTAGCGAAGTTAATGCCAGAAGGACAGGAGACACATATGACTGCCAGAGTACTCGGTACCTTTGGCTATTTTGATCCTGAGTACACATCGACTGGGAAACTCACTCTACAGAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGTCGAGCTGTAGATCTAAACCAAGGTCCAAACGATCAAAACCTTGTACTACAGGTGAGGCACATACTGAATGACCGCAAGAGGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCCTGTTTGCCAATCTGGCATCAAGATGTGTCCGTACTGAGAGTAATGAAAGACCTTCAATGGCAGAATGTGTAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG 762 0.4291 MPFGLVSLSAWNKRRRSKSQDHTDPCIVFFLSFLIHGVYKPAQLWQLEDQTPRPTKRLHGSSVYTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEISDFGLAKLMPEGQETHMTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKRLRKVIDPEMARNSYTIQSIVLFANLASRCVRTESNERPSMAECVKELLMIIYTNSKGLGMVMHSLRMI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0224 253 SUPERFAMILY Protein kinase-like (PK-like) 51 96 IPR011009 -
Aed11g0224 253 Pfam Protein kinase domain 100 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0224 253 SUPERFAMILY Protein kinase-like (PK-like) 100 239 IPR011009 -
Aed11g0224 253 Gene3D Phosphorylase Kinase; domain 1 53 101 - -
Aed11g0224 253 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0224 253 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 100 253 - -
Aed11g0224 253 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 100 - -
Aed11g0224 253 Gene3D Transferase(Phosphotransferase) domain 1 102 249 - -
Aed11g0224 253 PANTHER OS01G0750732 PROTEIN 100 253 - -
Aed11g0224 253 PANTHER OS01G0750732 PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0224 Aed-Chr11 1846245 1849031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0224 65 98 Receptor kinase-like Gene Family AT4G02010 52.941 9.02e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Aed11g0224 Pkinase 8.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0224 - - gmx:100796654 301.212