Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0217 ATGGAAGAACATCTCACTCCATTGGCTGTTACTCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAACTCTCAATGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGTGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTGGTGTGGGAAGACGGTTTCTGCAATTTTGCTGCCTCAGCAGCACCTGAAATTAACTCTGGTGATTGTTCTACACCATCTGTTTATGGGAACTGTGAGTTTCAGCCTTACCAAGGGCTTCAACCGGAGCTCTTCTTCAAGATGTCACATGAGATCTATAACTATGGAGAAGGGTTGATAGGAAAAGTGGCAGCAGATCACAGCCACAAGTGGATATACAAAGAGCCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGATTCGCACCCTAGGACTTGGGAAGCCCAGTTCCTGTCTGGTATAAAGACCATAGCTCTTATTGCTGTAAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGACCTGAGCTATGTGGTACTTTTGAGAAAAAAGTTCAGCTACATTGAGAGCATCCCTGGTGTGCTGTTGCCACATCCATCATCTTCTTCTGCATACCCTTATAAAGTAGAAGGAGTAGGGTATGGAGGGCCAGAACAATGGCATTTCCAAGGCAGCAACAACAGCCACCATCACCAAGCTGATCAGTTATATCATGACCACATCAACAACTTGCCACTGAAGATAACTCCTTCAATGAGTAGCCTCGAAGCACTTCTCTCTAAGCTCCCCTCAGTGGTACCACCGTCACAAATACCACAGTTACCAGCATCATCTCAACAACAACAAAGGCCATTGGAATTCATGGGAATGCAAAAAGTTGCAAAGGAAGAGCTAGAAGAAGAGGTTTACAGGCCAGAACTTGACATAGGTGAGAGTAGCAGTTCCATGCCAGGAGGAGGGTACCACCAACATCAACATCAACATCATTTCCACCATCAAGATCAGAATAATGTAACTAGGAGTGGAGCCAACAATGGATTTTGA 1104 0.4447 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGDCSTPSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSSAYPYKVEGVGYGGPEQWHFQGSNNSHHHQADQLYHDHINNLPLKITPSMSSLEALLSKLPSVVPPSQIPQLPASSQQQQRPLEFMGMQKVAKEELEEEVYRPELDIGESSSSMPGGGYHQHQHQHHFHHQDQNNVTRSGANNGF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0217 367 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 346 - -
Aed11g0217 367 MobiDBLite consensus disorder prediction 329 367 - -
Aed11g0217 367 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
Aed11g0217 367 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0217 Aed-Chr11 1781081 1784685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0217 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.771 4.08e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0217 - - gmx:100816910 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0217 11 1781081 1784685 Aed11g0217 11 1781081 1784685 ECH