Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0163 ATGGGCGATAGGGTGGAAACGCTTGCGAGAATAGCCCAGTGGAAAATCGACAACTTCGGACCTTGTTCCTACAAAAAATCTGAACCCTTCAAGGTCGGAATCTGGAACTGGTGCGTGTACTTTTCAATTGTGAGGAATAGGTGCCTGTACATACATCTATTTCCAGAACCTTCGCAGGTTTTGAAGGATAATCCACCCTTTGCTCGATTCATTCTTCGAGTCTCCAATGCTGGCTCATCCCGCAGCTTTCATGTTTCCCCAGTTCAAGAAAAGCTGCTTAGAACACATGATGATTTTGTCTGGCCTGTGGATACTACTTTTGTTGGTCGCTTCATCATTGATGTTGAGTTTCTAGACCTGAAGATATCCCCTCCCAGTGGTGGAGAAACTAGTTCTGTATGGCCATCTGATGGAAATTCTCAATCCATTGCATTCCAAAGTAGCACTCTTCATAGCCTCTCTCGCATGCTTGATGAGGCTATACATGCTGACCTAACCATCATCACTGCTGATGGAACAACATTGAGAGCTCATAAGGCAGTTCTCTCAGCAAGTTCTCCAGTGTTCCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCCTCCACAATTCACATTCAAGACATGTCACTTGAGTCCTGCAGTGCTCTTCTAAGTTATTTGTATGGCACAATCAAGCAAGAAGGTTTCTGGAAACACCGGCTCGCGTTGCTCGGAGCTGCAAATAAATATGACATTGGAAGCCTCAAAGACTTATGTGAGGAAAGCCTTATGGAAGATCTCAACTCAGGAAATGTTCTTGAGATGCTGAATGAGGCTTGGCTTTATCAATTGCACAAGCTTAAGAAAGGGTGCTTGGTTTTCTTATTTCAATTTGGTAAGATATATGATATCAAAGATGAAATGAATAAATTTTTCCAGCATGCAGATAGGGAGCTAATGCTGGAGATGTTTAACGAGGTGCTTTCAATTTCGAACCCTGTATAA 990 0.4283 MGDRVETLARIAQWKIDNFGPCSYKKSEPFKVGIWNWCVYFSIVRNRCLYIHLFPEPSQVLKDNPPFARFILRVSNAGSSRSFHVSPVQEKLLRTHDDFVWPVDTTFVGRFIIDVEFLDLKISPPSGGETSSVWPSDGNSQSIAFQSSTLHSLSRMLDEAIHADLTIITADGTTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIQDMSLESCSALLSYLYGTIKQEGFWKHRLALLGAANKYDIGSLKDLCEESLMEDLNSGNVLEMLNEAWLYQLHKLKKGCLVFLFQFGKIYDIKDEMNKFFQHADRELMLEMFNEVLSISNPV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0163 329 SMART BTB_4 163 262 IPR000210 GO:0005515
Aed11g0163 329 PANTHER OS08G0495500 PROTEIN-RELATED 1 329 IPR044714 -
Aed11g0163 329 CDD BTB_POZ_ZBTB_KLHL-like 162 245 - -
Aed11g0163 329 Gene3D Potassium Channel Kv1.1; Chain A 136 291 IPR011333 -
Aed11g0163 329 ProSiteProfiles BTB domain profile. 163 223 IPR000210 GO:0005515
Aed11g0163 329 Pfam BTB/POZ domain 156 260 IPR000210 GO:0005515
Aed11g0163 329 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 1 329 - -
Aed11g0163 329 SUPERFAMILY POZ domain 145 260 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0163 Aed-Chr11 1297949 1299757 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed11g0163 BTB 2.1e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0163 K10523 - gmx:100787262 615.92