Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0155 ATGCGGCGAGAGCAACCCCAGTCTCCTTGCCTAACTGATGTGGAGCCAGACAGAATCAGTTGCTTACCAGGTCACGTGATAGACCAAATTCTGTCACATTTGTCAATTAGGGAAGCAGTGAAAACAAGTGTTTTGTCTAGCAAATGGAGGTACAAATGGGCCACGCTACCAGTTCTTGTGTTCGATACCCAATGTGCCTCTGTGGCTTCTCAGGACAATATGATTATCAAGAACAAGCTCTTGAGAATTATAGATCATGTACTGCTACTTCATTCTGGGCCAATCAACAAGTTCAAGCTCTCCCATCGTGATCTCATTGGCGTGTCTGATATTGATCGTTGGTCGCTTCATCTATGCAGAAAGTATGTTAAAGAATTTGTGCTGGAAATCTGGAAAGGGCAACGTTATAAGATACACTCAAGTTTATTTTCTTGTCAAAGTTTGACTCATTTAGAATTGTTTAATTGCTGGCTTAAACCTCCGTCAACATTTAAAGGCTTCAAGAACCTCAAGAGTCTTGATCTGCAACATGTTACCCTGGCTCAGGATGTTTTTGAAAACTTGATATCCAGCTGCCCTCTGCTTGAACGGTTGACCTTGATGAACTTTGATGGTTTCACTCATCTTAATATTGATGCACCGAATCTCCTGTTTTTTGACATTGGAGGTAAATTCGAGGATATTAGCTTTGAGAACACTTTCCAATTAGCTGTGGTATCCATTGGTTTGTATTTGAACTTTGAAATCCATCAAAGTAGATTGCATGGAGGCTCTAGCAATTTGCTCAAGTTTTTCGTTCATCTGCCACACGTGCAAAGGCTAGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCTGTGGGGGTTGTGCCAATAAAGCTTCCAAGACCATGCTTTGATCTAAGTTATCTTTCCATACGAATAAACTTCAATGATATGAAGGAAATTTCAGCTGCTCTTTGCCTCTTAAGAAGCTCACCTAATCTACAAGAACTAGAAATATTGGCTCGACCTGAGGAGCAGACAGTTCTGTTAACACACAACTATTGTTGGGAAGATGTGTACTTTTCTTGTCCAGTGATGCAACTGCGAAATGTGAAGATAGATGGCATCTCTGGTATCAAACCAGAGTTAGATTTTATCAACTTTCTACTTCTATACTCTCCTGTTCTAGAAAGGATGACTGTGAAGCCTGTTGCAAACGTTGGAACAGAACTGATGAAAGAACTGTTGCGGTTTCGGAGAGCCTCGGGACGAGCTGAAATTATTTACCTCGAACTTTCTTAG 1284 0.4073 MRREQPQSPCLTDVEPDRISCLPGHVIDQILSHLSIREAVKTSVLSSKWRYKWATLPVLVFDTQCASVASQDNMIIKNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVSDIDRWSLHLCRKYVKEFVLEIWKGQRYKIHSSLFSCQSLTHLELFNCWLKPPSTFKGFKNLKSLDLQHVTLAQDVFENLISSCPLLERLTLMNFDGFTHLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSIGLYLNFEIHQSRLHGGSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCFDLSYLSIRINFNDMKEISAALCLLRSSPNLQELEILARPEEQTVLLTHNYCWEDVYFSCPVMQLRNVKIDGISGIKPELDFINFLLLYSPVLERMTVKPVANVGTELMKELLRFRRASGRAEIIYLELS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0155 427 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Aed11g0155 427 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 393 - -
Aed11g0155 427 SUPERFAMILY RNI-like 114 333 - -
Aed11g0155 427 SUPERFAMILY F-box domain 16 60 IPR036047 GO:0005515
Aed11g0155 427 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Aed11g0155 427 Gene3D Ribonuclease Inhibitor 99 412 IPR032675 -
Aed11g0155 427 PANTHER F-BOX PROTEIN-LIKE 13 393 - -
Aed11g0155 427 SMART 9598neu4hmm 356 424 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0155 Aed-Chr11 1203453 1206102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0155 14 216 EF-hand Containing Proteins AT5G41840 26.667 1.37e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0155 - - gmx:100782183 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0155 11 1203453 1206102 Aed11g0155 11 1203453 1206102 ECH