Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0115 ATGTTCTTCATCTTTCAGGATTCTTCTTTTCTTTATATGGGAAGATTGTTGGAAGGGTTTGGCGTAGGAATAATATCTTACACGGTGCCTGTGTACATAGCTGAGATAGCACCTCCAAACTTGAGGGGGGGTTTGGTTTCAGTTAACCAGCTCTCTGTCACCATTGGAATTATGCTGGCATATCTGCTGGGGATTTTTGTTGAATGGAGAATCCTTGCAATTTTAGGAATTTTACCCTGTACATTATTGATACCTGGCCTATTCTTCATTCCTGAGAGTCCTAGATGGCTAGCAAAAATGGGAAAGTCAGAGGAATTTGAAACTTCCTTGCAAGTGCTCCGAGGCTTTGATACTGATATTTCTGCTGAAGTGAATGAAATTAAGATTGGAATTGGACTGCTTATTTTGCAACAGCTTTCTGGAATTAATGGTGTTCTTTTTTACTCCAGTACCATCTTTCGAAATGCCGGAATTAGTTCGAGTGACGCGGCAACATTTGGAGTTGGTGCTGTTCAGGTTCTTGCCACCAGTTTAACTTTGTGGTTAGCAGACAAATCCGGTCGCCGGCTCCTCCTTATTGTCTCTGCATCTGCAATGGCTTTTAGTCTCTTAGTTGTTTCAGTCTCATTCTACATAAAGGATAGTATATCAGAAACTTCTTCCTTGTATGGGATATTGAGCACCTTGTCGCTGGTTGGAGTCGTGGCCATGGTTATTGCATTCTCTCTGGGAATGGGAGCTATGCCATGGATTATAATGTCTGAGAAGCTGGTTTTGTTGTTGTCAGGAACCTTCACCATATATGCAGTTGTGTGTGCCTTGACTGTAGTATTTGTTTCCATTTGGGTCCCTGAGACTAAGGGTAAAACTATTGAAGAAATCCAATGGTCTTTCAGATGA 900 0.4167 MFFIFQDSSFLYMGRLLEGFGVGIISYTVPVYIAEIAPPNLRGGLVSVNQLSVTIGIMLAYLLGIFVEWRILAILGILPCTLLIPGLFFIPESPRWLAKMGKSEEFETSLQVLRGFDTDISAEVNEIKIGIGLLILQQLSGINGVLFYSSTIFRNAGISSSDAATFGVGAVQVLATSLTLWLADKSGRRLLLIVSASAMAFSLLVVSVSFYIKDSISETSSLYGILSTLSLVGVVAMVIAFSLGMGAMPWIIMSEKLVLLLSGTFTIYAVVCALTVVFVSIWVPETKGKTIEEIQWSFR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0115 299 Pfam Sugar (and other) transporter 10 128 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed11g0115 299 Pfam Sugar (and other) transporter 263 298 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed11g0115 299 Gene3D MFS general substrate transporter like domains 258 299 IPR036259 -
Aed11g0115 299 PANTHER SUGAR TRANSPORTER ERD6-LIKE 6 262 297 - -
Aed11g0115 299 PANTHER - 6 128 - -
Aed11g0115 299 PANTHER - 129 258 - -
Aed11g0115 299 PANTHER - 262 297 - -
Aed11g0115 299 Gene3D MFS general substrate transporter like domains 129 257 IPR036259 -
Aed11g0115 299 SUPERFAMILY MFS general substrate transporter 3 295 IPR036259 -
Aed11g0115 299 PRINTS Sugar transporter signature 12 31 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g0115 299 PRINTS Sugar transporter signature 137 147 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g0115 299 PRINTS Sugar transporter signature 231 252 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed11g0115 299 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 299 IPR020846 GO:0022857
Aed11g0115 299 PANTHER SUGAR TRANSPORTER ERD6-LIKE 6 129 258 - -
Aed11g0115 299 PANTHER SUGAR TRANSPORTER ERD6-LIKE 6 6 128 - -
Aed11g0115 299 ProSitePatterns Sugar transport proteins signature 2. 17 42 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed11g0115 299 Gene3D MFS general substrate transporter like domains 1 128 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0115 Aed-Chr11 884419 889013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0115 6 299 Organic Solute Cotransporters AT1G75220 63.068 8.66e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0115 K03444 - gmx:100793493 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0115 11 884419 889013 Aed11g0115 11 884419 889013 ECH