Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0113 ATGTCTAGTCATGGTGCAACAGCTTTGGAGATTCCAGTTCCAAGCTACTGCAAAGTTAAGGTACACCGTTCAATATGCTTGGAGCTTCATGGACTCATTGATAGAATTTTGCATGTAATTTTAGCCATCGAATCTGCTCGACCAAATTGCACGTTAGCGATACAAGCATTGTGCTCATTACACTTCACTTTGGCTAAAGCCAAGTTAGTTATCAAACATTGCTCCAAACGCAGTAAACTCTACCTGGCAATCACATCGCACAAGATACTTTCAAGATGTCAAAAAGCAAGAAATGCTTTTGAGTTGTACTTGGCTCAGATTCAAAATGCGGTTCCAATACCATTGGCTGATAAGATATCTGCAATACTACACGACCTAAGGGATACAGAATTTTCCCTGGAATTTGCAGAGGACGAGGCTAGGAAAGTACTATTATCACTGCTTGAGAAGAATTTTCCTGATTCAGCTTCTACACAAAGGGAAGAACTTGAAGCTATTCAAATTGCAACTTCTAGATTGGAGATCAAAACCTCGTTTTCTCTCTTAGTAGAGAAAGCAACTCTTAAGAAGCAACTTGAAGAAATCAGTGAAACAAACCCAAAGGACAAGAAAATTATAGAATACCTTTTATATCTCTTGATCAAATATGGGAAATCCATTAGTCAGTTTCAAAATGGAAGCCACTTCACGAAACATGAATGTCATGACCAATCCTTTGACCATGAGTTGGTTGTGGATGAATCAAGTCAATAA 753 0.3838 MSSHGATALEIPVPSYCKVKVHRSICLELHGLIDRILHVILAIESARPNCTLAIQALCSLHFTLAKAKLVIKHCSKRSKLYLAITSHKILSRCQKARNAFELYLAQIQNAVPIPLADKISAILHDLRDTEFSLEFAEDEARKVLLSLLEKNFPDSASTQREELEAIQIATSRLEIKTSFSLLVEKATLKKQLEEISETNPKDKKIIEYLLYLLIKYGKSISQFQNGSHFTKHECHDQSFDHELVVDESSQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0113 250 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 25 234 - -
Aed11g0113 250 Gene3D - 13 111 IPR036537 GO:0007166
Aed11g0113 250 PANTHER U BOX DOMAIN-CONTAINING 25 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0113 Aed-Chr11 872011 874396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0113 20 189 U-box Gene Family AT4G36550 41.765 1.69e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0113 - - gmx:100796783 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0113 11 872011 874396 Aed11g0113 11 872011 874396 ECH