Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0104 ATGGGTTCAACATCCGAAACTGTTTGCGTAACGGGAGCCGCTGGTTTCATCGGGTCATGGCTTGTCATGAGACTCATGGAGCGTGGCTACATGGTTCGAGCCACCAACGAAGTGATAAAGCCCACGATAAACGGAATGCTAGACATAATGAAAGCATGCGAGAAGGCGAAAACAGTCCGAAGACTTGTGTTCACTTCCTCAGCGGGAACTGTGGATGTTACGGAGCAGCCAAAGCCTGTCATCGATGAGAACTGTTGGAGTGACGTTGACTTCTGTACAAGGGTCAAAATGACTGGCTGGATGTATTTCGTTTCAAAGACCCTGGCGGAGCAAGAAGCATGGAAATATGCGAAAGAGCACAACATAGACTTTGTATCAGTTATTCCACCCGTTGTCGTTGGTTCCTTTCTTATGCCGACAATGCCACCTAGCCTCATCACTGCTCTTTCCCTCATCACAGGAAATGAGTCTCATTACCATATCATAAAGCAGGGGCAGTTCGTCCACTTAGATGACCTTTGTCTTGGTCACATATTCGTTTTCGAGAATCCAAAAGCCGAAGGAAGGTACATATGCTGTTCACACGAGGCAACCATTCATGACATTGCAAAACTGATTAACCAAAAATACCCTGAATTTAATGTCCCTACAAAGTTCAAGAATATTCCAGATGAATTGGACATTGTTAAATTTTCTTCAAAGAAGATCACAGACTTAGGCTTCAAATTTAAGTACAGCTTAGAGGATATGTTCACAGGAGCCGTTGAAACCTGCAGAAAAAAAGGGCTTCTTCCTAAACCTGCAGAGCCAGAAGCTACAGTTAATGACACCGTGCAGAAATAA 843 0.4425 MGSTSETVCVTGAAGFIGSWLVMRLMERGYMVRATNEVIKPTINGMLDIMKACEKAKTVRRLVFTSSAGTVDVTEQPKPVIDENCWSDVDFCTRVKMTGWMYFVSKTLAEQEAWKYAKEHNIDFVSVIPPVVVGSFLMPTMPPSLITALSLITGNESHYHIIKQGQFVHLDDLCLGHIFVFENPKAEGRYICCSHEATIHDIAKLINQKYPEFNVPTKFKNIPDELDIVKFSSKKITDLGFKFKYSLEDMFTGAVETCRKKGLLPKPAEPEATVNDTVQK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0104 280 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 35 - -
Aed11g0104 280 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 35 269 - -
Aed11g0104 280 Pfam NAD dependent epimerase/dehydratase family 36 187 IPR001509 -
Aed11g0104 280 Pfam NAD dependent epimerase/dehydratase family 8 35 IPR001509 -
Aed11g0104 280 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 35 269 - -
Aed11g0104 280 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 35 - -
Aed11g0104 280 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 266 IPR036291 -
Aed11g0104 280 CDD FR_SDR_e 8 241 - -
Aed11g0104 280 Gene3D - 1 35 - -
Aed11g0104 280 Gene3D - 36 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0104 Aed-Chr11 818968 821592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0104 3 35 Miscellaneous Gene Families AT4G27250 63.636 1.12e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0104 K13082 - gmx:732626 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0104 11 818968 821592 Aed11g0104 11 818968 821592 ECH