Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0103 ATGGGTTCAGTATCCGAAAGTGTTTGCGTTACAGGAGCAGCTGGTTTCATCGGGTCATGGCTTGTCATGAGACTCATCGAGCGTGGCTATACGGTTCGAGCCACCGTACGCGACCCAGTGATAAAGCCTACAGTAAACGGAGTACTAGACATAATGAAAGCATGCCTGAAGGCAAAAAGTGTCCGGAGGCTAATATTCACGTCCTCAGCCGGAACCCTAAACGTTATTGAGCACAAAAAGCCCGTTTTCGATGAGACCTGCTGGAGTGACGTTGACTTTTGTCGGAGTGTTAAGATGACTGGTTGGATGTATTTTGTTTCAAAGACACTGGCGGAGAAAGAAGCATGGAAATTTGCGAAAGAGCATGGCATGGACTTCATCACTGTCATTCCACCTCTTGTCGTTGGTCCCTTTCTCATGCCAACAATGCCACCTAGCCTAATCACTGCTCTTTCGCCTATCACAGGAAATGAGGGACATTACTCGATCATAAAGCAAGGTCAATTCGTCCATTTAGATGATCTCTGTCTTGCTCATATATTTCTGTTTGAGGAACCAAAAGTGGAAGGGAGGTACATATGCAGTGCATGTGACACTACTATTCATGACATTGCCAAATTAATTAACCAAAAATACCCCGAGTACAAGGTCCCTACCAAGTTCAAGAATATTCCAGATGAATTGGAGCTTGTGAGATTTTCTTCCAAGAAGATCACAGACTTGGGATTCAAATTCAAGTACAGCTTAGAGGACATGTACACTGGAGCAATTGACTCATGCATAGAGAAAGGGCTTCTTCCTAAACCTGCAGAAAAAAAGGGCTTAATTCCTTAA 834 0.44 MGSVSESVCVTGAAGFIGSWLVMRLIERGYTVRATVRDPVIKPTVNGVLDIMKACLKAKSVRRLIFTSSAGTLNVIEHKKPVFDETCWSDVDFCRSVKMTGWMYFVSKTLAEKEAWKFAKEHGMDFITVIPPLVVGPFLMPTMPPSLITALSPITGNEGHYSIIKQGQFVHLDDLCLAHIFLFEEPKVEGRYICSACDTTIHDIAKLINQKYPEYKVPTKFKNIPDELELVRFSSKKITDLGFKFKYSLEDMYTGAIDSCIEKGLLPKPAEKKGLIP 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0103 277 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 40 269 - -
Aed11g0103 277 Gene3D - 1 39 - -
Aed11g0103 277 Gene3D - 40 275 - -
Aed11g0103 277 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 40 269 - -
Aed11g0103 277 Pfam NAD dependent epimerase/dehydratase family 8 38 IPR001509 -
Aed11g0103 277 Pfam NAD dependent epimerase/dehydratase family 40 187 IPR001509 -
Aed11g0103 277 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 2 39 - -
Aed11g0103 277 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 268 IPR036291 -
Aed11g0103 277 CDD FR_SDR_e 8 243 - -
Aed11g0103 277 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0103 Aed-Chr11 814194 817804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0103 3 38 Miscellaneous Gene Families AT4G27250 63.889 3.03e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0103 K13082 - gmx:548087 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0103 11 814194 817804 Aed11g0103 11 814194 817804 ECH