Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0060 ATGTCAGCGAAGTGCAGCCAAATCCGACACATTGTACGTCTGAGGCAGATGCTGCGGCGGTGGCGCAACAAGGCCCGCATGTCCGCGAACCGGGCACCACCGCCGGATGTACCGGCGGGACACGTGGCAGTGTGCGTGGGGAGCAACCTCACGAGATTCGTGGTGCGGGCCACGTACCTGAACCACCCCGTGTTCAAGAAGCTCCTCCTCCAAGCCGAGGAAGAGTATGGCTTCACCAACCACGGACCCTTGGCCATCCCCTGCGACGAAACGCTCTTCCAAGACGTTCTCCGGTTCATCTCCCGGTCCGACTCGGCCAAATCGAACCGCTTCTTGAACCAGCTCGAACTCGACGACTTTCAAAGACACCACTGCCACGTCGGCATCAGCAACAGCCTCGACTTCTGGCCCGAGTCTCGACCGCTCCTTCATGGCCCCACTGACAAAAACATTTGCAGATATGTACGAGAATTTATGTTCGATTTGATTCTCGTTGTACACAAAAACACAAAGAATGTCGATCCAGGAGATGGCAAATTAAGGGTGGGAGTCGTCCCGGGTTCGGATCGGAGAGGAGGAGGCTGTGATTTCATGGCTATTTTCAAGCTGAGATATGAGTCTCTCTAA 627 0.555 MSAKCSQIRHIVRLRQMLRRWRNKARMSANRAPPPDVPAGHVAVCVGSNLTRFVVRATYLNHPVFKKLLLQAEEEYGFTNHGPLAIPCDETLFQDVLRFISRSDSAKSNRFLNQLELDDFQRHHCHVGISNSLDFWPESRPLLHGPTDKNICRYVREFMFDLILVVHKNTKNVDPGDGKLRVGVVPGSDRRGGGCDFMAIFKLRYESL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0060 208 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 146 IPR003676 GO:0009733
Aed11g0060 208 Pfam Auxin responsive protein 13 99 IPR003676 GO:0009733
Aed11g0060 208 PANTHER SMALL AUXIN-UP RNA-RELATED 5 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0060 Aed-Chr11 446591 447474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0060 3 152 Calmodulin-binding Proteins AT4G34750 50.000 2.47e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0060 K14488 - gmx:100789753 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0060 11 446591 447474 Aed11g0060 11 446591 447474 ECH
Aed11g0060 11 446591 447474 Aed9g0233 9 1661271 1661609 PCT