Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0017 ATGGGAGCGGCAACAGTGAAGGTGTACGGGCCACCCATGTCCACCGCCGTGTCGAGGGTGTTGGCGTGTCTGGTGGAGAAAGACATCAAATTTCAACTAATTTCTGTTAACATGTCCAAAGGCGAACACAAGAAGCCTGATTTCCTCAAGATTCAGCCCTTTGGCCAAGTACCAGCATTTCAAGATGAGGATGAGAACATTTCCCTCTTCGAGTCGAGAGCGATATGCCGGTACGTATGCGAGAAATACGGGGAGAAAGGGAACAGGGAACTGTACGGCGGGACGAATCCGTTGGCGAAGGCGTCCATAGATCAATGGTTGGAGGCTGAAGGGCAGAGCTTCAACCCACCATCATCCACACTGGTGTTCCAGCTGGCATTCGCTCCACGGATGAAGATCAAGCAAGACGAGGGCGCCATCAAACAGAGCAAAGAGAAGCTGGCAAAAGTGCTGGATGTGTACGATAAGAGGCTTGGGGAGAGCCGTTTCTTAGCAGGGGATGAATTCTCACTCGCTGATCTTTCCCATCTTCCCAACACCCACTACTTGCTCGCTGCCCCGGACGCTGCTCCACTCTTCACTTCCTCTCCCAACGTCTCCAGGTGGTGGAACGACATCTCCTCCCGTGACGCCTGGAAAAAGGTCCTTCAACTGCAACAGCAAGGTGCTTGA 672 0.5298 MGAATVKVYGPPMSTAVSRVLACLVEKDIKFQLISVNMSKGEHKKPDFLKIQPFGQVPAFQDEDENISLFESRAICRYVCEKYGEKGNRELYGGTNPLAKASIDQWLEAEGQSFNPPSSTLVFQLAFAPRMKIKQDEGAIKQSKEKLAKVLDVYDKRLGESRFLAGDEFSLADLSHLPNTHYLLAAPDAAPLFTSSPNVSRWWNDISSRDAWKKVLQLQQQGA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0017 223 SUPERFAMILY Thioredoxin-like 3 87 IPR036249 -
Aed11g0017 223 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Aed11g0017 223 Gene3D Glutaredoxin 3 93 - -
Aed11g0017 223 SFLD Glutathione Transferase (cytosolic) 4 220 IPR040079 -
Aed11g0017 223 Gene3D - 95 216 - -
Aed11g0017 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 96 223 IPR010987 -
Aed11g0017 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Aed11g0017 223 PANTHER GLUTATHIONE S-TRANSFERASE RHO 6 221 - -
Aed11g0017 223 CDD GST_N_Phi 5 82 - -
Aed11g0017 223 CDD GST_C_Phi 98 216 IPR034347 -
Aed11g0017 223 SUPERFAMILY GST C-terminal domain-like 90 217 IPR036282 -
Aed11g0017 223 Pfam Glutathione S-transferase, C-terminal domain 120 210 IPR004046 -
Aed11g0017 223 SFLD Main.5: Phi-like 4 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0017 Aed-Chr11 138858 140040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0017 8 221 Glutathione S-transferase Gene Family AT2G47730 50.000 9.06e-68 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0017 K00799 - rcu:8267851 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0017 11 138858 140040 Aed11g0017 11 138858 140040 ECH