Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0015 ATGCGTGATTCCAATTCTACTAATATTTTCTCCTTTTTCTCTCTACTAATATTAATGCATCCAACGTTCTTCCCTTCTCAGATCAATCTGGTGCTGCAGGAACGTGATCAAACCACTCAACAAAGTGATCTCGGTGCAGTTTTGCGTGATGGAAACGATATACTTCTTCAGGCATTCAACTGGGAGTCTAACAAACACAACTGGTGGAATAATTTAGAAAGAAAAGTTCCTGACATAGCTAAAGCTGGATTTACTTCGGTCTGGTTGCCACCACCAACTCACTCCTTCTCACCTGAAGGTTATACTCCGCAGAACCTTTATTCACTTAACAGTAAATATGGTTCTGAGCGTCAATTAAAAGCTCTTCTTCAAAAGATGAAACAATACAAAGTCAGAGCAATGGCCGACATAGTTATTAATCATCGTACTGGCACTACCCAAGGACGTGGAGGAACCTATAATCGTTTTGATGGAATCCCATTAGCATGGGATGAACGTGCCGTGACATCAGATACTGGAGGATTGGGTAACCGAAGCACAGGAGCCATTTTTCATGGGTTTCCCAATATTGACCATACTCAGGATTTTGTGAGAAAGGATATCATAGGTTGGCTCCGTTGGCTGCGCCATGAAGTAGGCTTCCAGGATTTTCGTTTCGATTTTGTAAAGGGGTTTTCACCGAAATATGTGAAAGAATATATTGAAGGAGCAAAACCATTGTTTTGTGTCGGGGAATACTGGGATTCTTGTAACTACAAGGGTTCTACTTTGGACTATAACCAAGATAGCCATAGACAGCGAATAATCAATTGGATTGATGGCACTGGACAACTTTCAACTGCATTTGACTTTACAACAAAGGGAATTCTCCAGGAAGCTGTCAAAGGAGACTTTTGGCGTCTGCGTGATCCTAAAGGGAAGTCCCCAGGTTTGGTCGGATGGTGGCCTTCAAGAGCTGTCACATTTGTAGATAATCATGATACAGGTTCAACTCAGATTGACGTTCGCAAGCGTCAAGGTATTAAAAGTAGATCAGCTGTGAGGATTCTGGAAGCCAAACACGACCTTTACTCTGCAGTAATCGGAGAGAAGGTGTGCATGAAGATTGGAAATGGTTCATGGTGCCCAAGTGGGAGGGAATGGACACTATCAACTTCTGGCCACAACTACGCTGTGTGGCACAAGTAG 1188 0.4285 MRDSNSTNIFSFFSLLILMHPTFFPSQINLVLQERDQTTQQSDLGAVLRDGNDILLQAFNWESNKHNWWNNLERKVPDIAKAGFTSVWLPPPTHSFSPEGYTPQNLYSLNSKYGSERQLKALLQKMKQYKVRAMADIVINHRTGTTQGRGGTYNRFDGIPLAWDERAVTSDTGGLGNRSTGAIFHGFPNIDHTQDFVRKDIIGWLRWLRHEVGFQDFRFDFVKGFSPKYVKEYIEGAKPLFCVGEYWDSCNYKGSTLDYNQDSHRQRIINWIDGTGQLSTAFDFTTKGILQEAVKGDFWRLRDPKGKSPGLVGWWPSRAVTFVDNHDTGSTQIDVRKRQGIKSRSAVRILEAKHDLYSAVIGEKVCMKIGNGSWCPSGREWTLSTSGHNYAVWHK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0015 395 CDD AmyAc_arch_bac_plant_AmyA 54 347 - -
Aed11g0015 395 PANTHER ALPHA-AMYLASE 2-RELATED 333 395 - -
Aed11g0015 395 SUPERFAMILY Glycosyl hydrolase domain 341 395 - -
Aed11g0015 395 SMART aamy 53 348 IPR006047 GO:0005975
Aed11g0015 395 PANTHER ALPHA-AMYLASE 48 332 - -
Aed11g0015 395 Gene3D Glycosidases 38 344 - -
Aed11g0015 395 PANTHER ALPHA-AMYLASE 333 395 - -
Aed11g0015 395 SMART alpha-amyl_c2 337 395 IPR012850 GO:0004556|GO:0005509|GO:0005975
Aed11g0015 395 SUPERFAMILY (Trans)glycosidases 62 333 IPR017853 -
Aed11g0015 395 Pfam Alpha-amylase C-terminal beta-sheet domain 338 394 IPR012850 GO:0004556|GO:0005509|GO:0005975
Aed11g0015 395 PANTHER ALPHA-AMYLASE 2-RELATED 48 332 - -
Aed11g0015 395 Pfam Alpha amylase, catalytic domain 75 143 IPR006047 GO:0005975
Aed11g0015 395 PRINTS Alpha-amylase signature 130 141 IPR006046 GO:0004556|GO:0005975|GO:0043169
Aed11g0015 395 PRINTS Alpha-amylase signature 214 225 IPR006046 GO:0004556|GO:0005975|GO:0043169
Aed11g0015 395 PRINTS Alpha-amylase signature 317 329 IPR006046 GO:0004556|GO:0005975|GO:0043169
Aed11g0015 395 Gene3D - 345 395 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0015 Aed-Chr11 129826 134985 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0015 36 395 Glycoside Hydrolase AT1G76130 65.926 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0015 K01176 - gmx:100813490 701.049