Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0012 ATGAAGCTCAACATAGCGGCTGCGGCTGTGGTGTGTTATTCTCTGTTTGCAATTACAGTCGTGGCTGAAGATCCCTACAGGTTCTTCAACTGGAATGTTACATACGGAGACATTTATCCACTTGGTGTTCGCCAACAGGGAATACTTATCAACGGTCAATTCCCAGGTCCAGACATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTTAACAGCTTGGACCAGCCATTTCTCATCTCCTGGAACGGGGTCCAGCAGAGAAGGAACTCATTCGAAGATGGGGTATTGGGAACAACATGCCCGATCCCACCAGGAGGGAACTTCACCTACATACTTCAAGTGAAGGATCAAATTGGAAGCTTCTACTACTTCCCATCTCTTGCATTCCACAAAGCTGCTGGTGGCTTTGGAGGCATTAGGATTTTGAGCAGGCCTAGAATTCCAGTCCCTTTTGATGATCCTTCCGGTGATTACACTGTCCTCATTGGAGATTGGTACAAGCTCAACCACACGGTATATCCCAAGTCATGGACTGCTATATATATTGCGCTCGACAATGTGGGAATGTGGAACTTGAGGTCTGAATTTTGGGCACGGCAATACCTTGGTCAACAGTTTTACTTACGTGTTTATACAACATCCACCTCACTCAGAGATGAATATCCTGTTCCAAAGAATGCACTACTTTGTGGTAGGGCAAGTGGGAGACACACTCGACCCCTTTGA 732 0.4604 MKLNIAAAAVVCYSLFAITVVAEDPYRFFNWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLISWNGVQQRRNSFEDGVLGTTCPIPPGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFDDPSGDYTVLIGDWYKLNHTVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQFYLRVYTTSTSLRDEYPVPKNALLCGRASGRHTRPL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0012 243 Gene3D - 149 240 IPR008972 -
Aed11g0012 243 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Aed11g0012 243 Gene3D - 26 147 IPR008972 -
Aed11g0012 243 Pfam Multicopper oxidase 173 215 IPR011706 GO:0005507|GO:0016491
Aed11g0012 243 PANTHER MULTI-COPPER OXIDASE 9 173 IPR045087 -
Aed11g0012 243 PANTHER MULTI-COPPER OXIDASE 174 236 IPR045087 -
Aed11g0012 243 SUPERFAMILY Cupredoxins 173 242 IPR008972 -
Aed11g0012 243 SUPERFAMILY Cupredoxins 16 173 IPR008972 -
Aed11g0012 243 PANTHER SKU5-SIMILAR 6 9 173 - -
Aed11g0012 243 PANTHER SKU5-SIMILAR 6 174 236 - -
Aed11g0012 243 CDD CuRO_1_AAO_like_1 28 143 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0012 Aed-Chr11 79088 84648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0012 - - gmx:100812416 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0012 11 79088 84648 Aed11g0012 11 79088 84648 ECH
Aed11g0012 11 79088 84648 Aed9g0181 9 1296137 1302580 PCT