Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0011 ATGGAGGAGAAGAACATAGACATAGACCCGAGGAGTGGTTTCTGCAGGTCCAATTCAATCTTCTACAGCAAGCGTAAGCCCCTCCCACTCCCTCCCAACAACGCCTTAGACGTCACCACCTTCATCTCCTCCCGCGCCCACCACGGCACCACCGCCTTCATCGACGCCGCCACTGGCCGCAGCCTCACCTACAAGCAGCTATGGCGAGCTGTGGAGGGCGTGGCAACCTCTCTTTCCGACATGGGGATCCGAAAGGGCAACGTGGTCCTCATCCTCTCTCCCAACTCCATCCACTTTCCGGTGGTGTGCCTGGCTGTGATGTCCCTGGGCGCCATAATCACTACCACCAACCCCCTCAACACCACGCGCGAAATCGGCAAGCAGATCGCCGATTCCAAGCCCCTCCTCGCCTTCACAATCCCTTCTTTACTCCCAAAAATCACCGGAGCAGCGCCCTCTCTACCAATAGTTCTAATGGAGATGGAGAAGGAGAAGGAGAACAACTCCAATATTGTCTCCACGCTTGAGGAGATGGCGAAGAAGGAACCCGGCGGGGCTGGGCGCGTGAGGGAGCGCGTGGATCAGGACGACACGGCAACCCTGCTCTACTCGTCCGGCACGACGGGTCCGAGCAAGGGCGTGGTTTCCTCCCACCGGAACCTAATAGCGATGGTACAAATCGTGCTGGGTCGGTTCCAGATTGAAGCGAACGAAACCTTCATCTGCACGGTCCCGATGTTTCACATATACGGTCTGGTGGCCTTCGCGACGGGGCTTCTGGCTTCGGGGTCGACCATCGTGGTGCTGTCCAAGTTCGAGATGCACGACATGCTCTCATCGATACAGAGGTTCCGCGCCACGTACCTACCGCTCGTGCCTCCCATCCTGGTGGCCATGCTCAACAACGCCCACGCCATCAAGGCCAAGTACGACATCAGCTCGCTGCATTCAGTGCTCTCTGGTGGTGCTCCCTTGAGTAAGGAAGTCATAGACGGCTTTGTGGACAACTACCCTAACGTCACCATCCTTCAGGGTTATGGTTTGACGGAATCCACCGGCGTTGGGGCCTCCACCGATTCCTTCGAGGAGAGTCGAAGGTACGGCACGGCGGGTCTCTTGTCGCCTGCCACCCAGGCTATGATTGTCGACCCTGACTCCGCCCAATCGCTTCCGGTTAACAGCACTGGGGAGCTCTGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAAGAAGCAACCACATCAACCCTTGATTCAAAAGGATGGTTAAGAACAGGAGATGTTTGTTACATTGACAATGATGGATTCATATTTATTGTCGATCGGTTAAAGGAGCTCATCAAATACAAGGGATATCAGGTCCCTCCAGCTGAACTAGAGGCCTTGTTACTGACTCATCCTGCTATCTTTGATGCTGCTGTTATCCCGTATCCAGATAAGGAAGCTGGGCAGTATCCAATGGCATACGTGGTGAGGAAGCCTGGAAGTAACTTATCAGAAAGCCAGGTTATGGATTTTGTTGCAGGACAGGTGGCTCCGTACAAGCGGATTCGAAAAGTGGCCTTTATATCCTCCATACCCAAAAATCCATCTGGCAAAATTCTTCGGAAGGATCTCATCAAACTCGCAACGTCTAAACTCTGA 1653 0.5426 MEEKNIDIDPRSGFCRSNSIFYSKRKPLPLPPNNALDVTTFISSRAHHGTTAFIDAATGRSLTYKQLWRAVEGVATSLSDMGIRKGNVVLILSPNSIHFPVVCLAVMSLGAIITTTNPLNTTREIGKQIADSKPLLAFTIPSLLPKITGAAPSLPIVLMEMEKEKENNSNIVSTLEEMAKKEPGGAGRVRERVDQDDTATLLYSSGTTGPSKGVVSSHRNLIAMVQIVLGRFQIEANETFICTVPMFHIYGLVAFATGLLASGSTIVVLSKFEMHDMLSSIQRFRATYLPLVPPILVAMLNNAHAIKAKYDISSLHSVLSGGAPLSKEVIDGFVDNYPNVTILQGYGLTESTGVGASTDSFEESRRYGTAGLLSPATQAMIVDPDSAQSLPVNSTGELWLRGPTIMKGYFSNEEATTSTLDSKGWLRTGDVCYIDNDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPAIFDAAVIPYPDKEAGQYPMAYVVRKPGSNLSESQVMDFVAGQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSKL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0011 550 Gene3D - 19 447 IPR042099 -
Aed11g0011 550 Pfam AMP-binding enzyme 45 452 IPR000873 -
Aed11g0011 550 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Aed11g0011 550 CDD 4CL 30 542 - -
Aed11g0011 550 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Aed11g0011 550 SUPERFAMILY Acetyl-CoA synthetase-like 44 547 - -
Aed11g0011 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 549 - -
Aed11g0011 550 Coils Coil 158 181 - -
Aed11g0011 550 Gene3D - 448 549 IPR045851 -
Aed11g0011 550 PANTHER BNAA06G14440D PROTEIN 8 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0011 Aed-Chr11 68697 74531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0011 3 550 Monolignol Biosynthesis Gene Families AT1G20500 65.343 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0011 K10526 - gmx:100811344 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0011 11 68697 74531 Aed11g0011 11 68697 74531 ECH