Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0006 ATGAGTTGCTTTTGTTCTGGTACTCGTGGGAAGGATGTGGGGGGTGTTGTTAACGTTGTTGCTGCTGATAATATAGGGCCAAAGCCGGCCAAGAAAGCCTCAGCCACGAGTTTCAGTTTTCGCGAGCTTGCATCGGCAGCCAGGGGGTTTAAGGAAGTGAACTTGATTGGGGAAGGAGGTTTTGGAAAGGTTTACAAGGGTCGTCTCTCTACGGGCCAGCTTGTTGCTATTAAACAATTGCGTCTTGATGATCCTAACCCTGAGAAAAAAGCTGTAAGTTGGCGAACTCGACTGAAGATTGCTGTGGGGGCTGCCCGGGGCCTCCAGTATCTCCATTGTGCAGCCAATCCACCTGTAATCTATCGGGACTTGAAATCTGCTAACATCTTATTAGACAATCATTTAAACCCAAAACTCTCTGATTTTGGGCTTGCTAAACTAGGACCCCTTTCGCAAATCGTTGATCCTCTTTTGGAAGGAAACTACCCCTTGCGTTGTTTGCACAATGCAATTGCTATTACTGCAATGTGCCTCCAGGAGCAACCAAATCTCCGTCCATCCATTGGTGATATTGTCGTTGCACTCGAGTACTTGACCTCTGAAAGTCTTTCTGAAGTCACTAGGCATGCTCGCCGCACCCCACTACAATCAGAAACTCAAACAGATAGAAACTAG 675 0.4711 MSCFCSGTRGKDVGGVVNVVAADNIGPKPAKKASATSFSFRELASAARGFKEVNLIGEGGFGKVYKGRLSTGQLVAIKQLRLDDPNPEKKAVSWRTRLKIAVGAARGLQYLHCAANPPVIYRDLKSANILLDNHLNPKLSDFGLAKLGPLSQIVDPLLEGNYPLRCLHNAIAITAMCLQEQPNLRPSIGDIVVALEYLTSESLSEVTRHARRTPLQSETQTDRN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0006 224 Gene3D Transferase(Phosphotransferase) domain 1 32 87 - -
Aed11g0006 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Aed11g0006 224 Gene3D Transferase(Phosphotransferase) domain 1 88 150 - -
Aed11g0006 224 Pfam Protein kinase domain 92 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0006 224 SUPERFAMILY Protein kinase-like (PK-like) 36 206 IPR011009 -
Aed11g0006 224 PANTHER OS07G0668900 PROTEIN 151 219 - -
Aed11g0006 224 PANTHER OS07G0668900 PROTEIN 82 150 - -
Aed11g0006 224 PANTHER OS07G0668900 PROTEIN 30 80 - -
Aed11g0006 224 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Aed11g0006 224 SMART serkin_6 50 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0006 224 Gene3D Transferase(Phosphotransferase) domain 1 151 221 - -
Aed11g0006 224 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed11g0006 224 PANTHER OS07G0668900 PROTEIN 151 219 - -
Aed11g0006 224 PANTHER OS07G0668900 PROTEIN 82 150 - -
Aed11g0006 224 PANTHER OS07G0668900 PROTEIN 30 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0006 Aed-Chr11 42883 44090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0006 152 198 Glycoside Hydrolase AT3G07070 46.809 2.74e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aed11g0006 Pkinase 1.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0006 - - jre:109002945 171.785