Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0004 ATGACATCCTTTACTTCCGAACTTGGAGTTCATTTTGAAACTAGTCTAGAAGCTCCTCATGTAATTGATGTTGACTCACAGGTGTGGCATGCTATAATCTCCACTGGTCCTGGCAATTATCCGTTGAATGCAGGTTATAAAACAGCAGATGGATATGCATTCCAGGATGCAGTTGGAAAATCTTTAGAGGAAATCTTCAAGATTGTTCCAGGTGGATGCCTTGTGTTCTTTCCAAGTTATAAATTGATGGAAAAATTACGCAACCGTTGGTCTGAAACAAGTCAATGGTCTCGACTAAATGCAGAAAAGCCTCTTTTTGTTGTTTTTAGAATTTCTATTGTGTTTGTGCTTGTTGCATTAAAGGGTTATTATGATTCAATTCATCATGGCAAAAGACCTGCACTGGGAAGGAAAAGAAAGATTAAGAAAATTGATCTAAATCATGTTCATGCAGTTGATTCCCTACAGAATTCTAAGAAAGGAGGAGCTGCTTTACCTGGTGTTTGTCGAGGAAAGGTGCGCCATTATTTTACTTGTATCTAA 543 0.3794 MTSFTSELGVHFETSLEAPHVIDVDSQVWHAIISTGPGNYPLNAGYKTADGYAFQDAVGKSLEEIFKIVPGGCLVFFPSYKLMEKLRNRWSETSQWSRLNAEKPLFVVFRISIVFVLVALKGYYDSIHHGKRPALGRKRKIKKIDLNHVHAVDSLQNSKKGGAALPGVCRGKVRHYFTCI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0004 180 Gene3D - 39 175 IPR027417 -
Aed11g0004 180 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 1 174 IPR045028 -
Aed11g0004 180 Pfam Helicase C-terminal domain 62 173 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Aed11g0004 180 PANTHER FANCONI ANEMIA GROUP J PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0004 Aed-Chr11 27441 28336 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0004 K15362 - gmx:100779610 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0004 11 27441 28336 Aed11g0004 11 27441 28336 ECH