Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2174 ATGGAAACAGCACTCACCTGCTTCTTCTGTGGTCGAGTCCCACCCAAAACTGCAACTGCAAGTTGTAATAATGCCTCCTCCGGACACGTGCGTTTTTCTCTGCCCCCTTCATTTGGAACCCATAGGCTAATTCGAAACGCCACTAACACTAACAGCAGCACCAGTGAAACTAAGGTGGTTGTCAAAAGTAGAGGAAGGAGAAGAAGAAGAAGAAGAAGTGACTTTGTTGATAAAAGTGTGTCTTCTTCTCAGACTCAGGTGTTGGAGGAGGGTATTGGTATTCTTCATCAGAACGGAGACCCTATTGGTAAGAAGGATCTCGGAAAGAGTGTGATGAGGTGGATTCGTGATAGCATGAGGGCGATGGCGTCTGATTTAGCTGCAGCAGAGTTACAGGGAGAGTTGGAGTTGGAGTTGTGGGAGCGCATAGGACCGGGTCTCACTTTTATTATGCAGGCACAGCCATATCTCAATGCGGTTCCTATGCCCATTGGCCTTGAGGGTCTCTGCTTGAAGCATAGGGCGGTTGTGAGAAAGATAACACAACCCAAGAGTGTCCAAGGCGTTTTAGGAATGGACTTCGAAAAGGTCGAAGCAATACAGCACAGGATTGATGAATTCACGACCCACATGTCAGAACTACTCCGTATTGAAAGGGATGCTGAATTGGAGTTTACTCAGGAGGAATTGGATGCTGTTCCTAAACCAGATGATTCTTCTGATTCTTCAAAACCGATTGATTTCTTGGTTAACCATAGCCAGCCTCAACAAGAACTTTGTGACACCATTTGTAATTTAAATGCCATCAGTACCTCTACAGGTATATCTTTGTCGACAGCCCTACCTTCACCACCTAAGCCCATTCCACCTTCTATTGCTGATGACATCACTACAAACTCTACGTTGAAGCCAACTTGTCTACCTGCTTTAGTCCTAGCGCCTAGACTGGGGGGAATGCACTTGGTGTTATTCAAGGTTGAAGGGAACCACCGGTTACCACCTACCACTCTTTCACCTGGAGACATGGTTTGTGTGAGAACATATGACAGCACGGGTGCAATTACAACTTCTTGCATACAAGGATTTGTGAACAGTTTTGGGGATGATGGCTATAGTATTACAGTTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTATTTGGGAAGAGTCGCAACTGTGAAGCTTTAATGCTACTTCAGAAGAATGGTTTACGAAAGAAGAATCCTTCAATTTCTGTTGTTGCTACACTGTTTGGAGATGAGGAAGATGTTACATGGCTTGAGAAAAATCATTTGGCTGACTGGGCAGAAGAAAAATTGGATGGAAGATTAGGAAGTGAAACCTTTGATGATTCTCAGTGGAGAGCAATTGCAATGGGTTTGAATAAAAAGAGGCCTGTATTGGTTATCCAAGGACCTCCGGGTACAGGCAAGACTGGTTTGCTCAAGCAACTTATAGCATGTGCTGTTCAGCAAGGTGAAAGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTTGATAACATTGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTGCGGGTTGGAAATCCAGCTCGTATATCAAAAACAGTGGGATCAAAGTCTTTGGAAGAAATTGTAAATACTAAGCTTGCAAGTTTTCGAGAAGAGTATGAGAGGAAGAAGTCAGATTTAAGAAAAGATCTAAGACATTGTCTAAGGGATGATTCACTAGCTTCAGGCATACGCCAACTTCTGAAGCAGCTGGGAAGGTCACTGAAGAAAAAGGAAAAGCAGACCATAATTGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGACCCTTTGATTCGAAGGCTAGATACTTTTGACTTGGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCCTCTTGCTGGATTCCTATATTGCAGGGAAAGCGCTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTAGAAAGTGGTCTAGGAATATCTTTACTGGAGAGAGCTGCAACTTTGCATGAAGGGATTCTCACCACTAGGTTAACAACACAATATCGTATGAATGATGCAATTGCTAGTTGGGCTTCAAAGGAGACGTATGGAGGATTGTTGAAGTCCTCTGAGACTGTCTTTTCTCATCTTCTAGTAGACTCTCCTTTTGTTAAGCCTACTTGGATAACACAATGCCCACTGCTATTGCTAGATACTAGAATGCCATATGGAAGTCTGTCAGTTGGTTGTGAAGAGCATCTAGACCCAGCTGGAACAGGCTCGTTTTATAATGAAGGAGAAGCTGAGATAGTTTTGCAGCATGTGTTTTCCTTAATCTATGCTGGTGTTAGCCCAACTGCTATTGCAGTGCAATCCCCTTATGTTGCTCAAGTACAACTTTTGAGGGACAAGCTAGATGAATTTCCAGAAGCAGCAGGTACTGAGGTTGCGACCATTGACAGTTTTCAAGGTCGGGAAGCTGATGCAGTAATATTATCCATGGTACGATCAAACACATTGGGAGCTGTTGGATTCCTCGGGGATAGCAGAAGAATCAACGTTGCCATCACAAGAGCACGCAAACATTTAGCTTTGGTCTGTGACAGCTCGACTATATGCCACAATACCTTCTTAGCAAGGCTTCTGCGTCATATTAGACACTTTGGTAGGGTGAAGCATGCAGAACCAGGTAGTTTTGGTGGATATGGACTTGGGATGAATCCAATATTACCTTCCATTAATTAG 2781 0.4355 METALTCFFCGRVPPKTATASCNNASSGHVRFSLPPSFGTHRLIRNATNTNSSTSETKVVVKSRGRRRRRRRSDFVDKSVSSSQTQVLEEGIGILHQNGDPIGKKDLGKSVMRWIRDSMRAMASDLAAAELQGELELELWERIGPGLTFIMQAQPYLNAVPMPIGLEGLCLKHRAVVRKITQPKSVQGVLGMDFEKVEAIQHRIDEFTTHMSELLRIERDAELEFTQEELDAVPKPDDSSDSSKPIDFLVNHSQPQQELCDTICNLNAISTSTGISLSTALPSPPKPIPPSIADDITTNSTLKPTCLPALVLAPRLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTYDSTGAITTSCIQGFVNSFGDDGYSITVALESRHGDPTFSKLFGKSRNCEALMLLQKNGLRKKNPSISVVATLFGDEEDVTWLEKNHLADWAEEKLDGRLGSETFDDSQWRAIAMGLNKKRPVLVIQGPPGTGKTGLLKQLIACAVQQGERVLVTAPTNAAVDNIVEKLSNVGLNIVRVGNPARISKTVGSKSLEEIVNTKLASFREEYERKKSDLRKDLRHCLRDDSLASGIRQLLKQLGRSLKKKEKQTIIEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALESGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKETYGGLLKSSETVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEAEIVLQHVFSLIYAGVSPTAIAVQSPYVAQVQLLRDKLDEFPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLALVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGYGLGMNPILPSIN 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2174 926 Pfam AAA domain 678 881 IPR041679 -
Aed10g2174 926 CDD DEXXQc_SMUBP2 452 701 - -
Aed10g2174 926 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 50 172 - -
Aed10g2174 926 SMART ultradead3 448 700 IPR014001 -
Aed10g2174 926 CDD SF1_C_Upf1 702 898 IPR041679 -
Aed10g2174 926 SMART AAA_5 467 682 IPR003593 -
Aed10g2174 926 Pfam AAA domain 452 668 IPR041677 GO:0004386
Aed10g2174 926 Coils Coil 553 573 - -
Aed10g2174 926 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 172 276 - -
Aed10g2174 926 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 315 926 - -
Aed10g2174 926 Gene3D - 390 684 IPR027417 -
Aed10g2174 926 Gene3D - 700 908 IPR027417 -
Aed10g2174 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 888 IPR027417 -
Aed10g2174 926 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 315 926 - -
Aed10g2174 926 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 172 276 - -
Aed10g2174 926 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 50 172 - -
Aed10g2174 926 Gene3D - 315 389 - -
Aed10g2174 926 MobiDBLite consensus disorder prediction 49 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2174 Aed-Chr10 25159995 25169635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2174 438 641 Core DNA Replication Machinery Family AT1G08840 25.728 4.84e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2174 - - gmx:100799347 1524.22