Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2173 ATGGACACATCTTCATCATCACTGGTGTTTACCGTGAGGAGGCGTAAGGCAGAGCTAATAGCTCCGGCGAAACCTACCCCTCGCGAAGTGAAACTTCTCTCAGACATAGATGACCAAGATGGGTTACGGTTCCAAATTCCGGTGATACAGTTTTATGGCCACGACCCATCAATGGAAGGGAAAGATCCTGTCGATGTGATTAGGAAGGCTGTGGCCAAAACGCTTGTGTTTTACTATCCTTTTGCAGGTAGGCTCAGAGAAGGACGTGGTCGGAAACTGATGGTGGATTGTACTGGGGAAGGTGTTTTGTTCATCGAAGCTGACGCTGACGTCACGCTCAAACAATTTGGTGATGCTCTTCAACCTCCTTTCCCATGCTGGGAGGAACTCCTTTACGATGTTCCCGACTCTCAAGGAGTTCTTAACACTCCACTCCTGCTTATACAGGTAACGCGGCTGAAGTGCGGTGGTTTCATTTTCGCTCTCCGGCTGAACCACACGATGAGCGACGCAGCCGGTGTGGTCCAATTGATGAGCGCCATGGGCGAAATAGCTCGCGGGAGGAAGGAGCCATCGGTCCCACCGGTGTGGTGCAGAGAGCTTCTGAACGCGCGGGACCCACCGAGAGTAACATGCACCCACCGCGAATACGAACAAGTCCCTGACACGAAAGGAACCATCATCCCCTTAGACGACATGGCCCATCGGTCTTTCTTCTTCGGCCCAAGCGAGGTGGCCTCCATCCGTCGCCTACTCCCCCCTCAGCACGGGCAATGCTCAAACTTCGAAGTCCTGACCGCATGCCTCTGGCGCTGCCGAACCATAGCGCTGCAACCGGAGAAAGACGAGGAGGTTCGGATACTCTGCATAGTGAACGCGCGCGGCAAGTTTGAGCCTCCTCTGCCGAGCGGTTACTACGGGAACGCTTTCGCGTTCCCCGTTGCGGTGACAAGTGCGGGGAAGCTATGCGAGAATCCGTTGGGGTACGCTGTGGAGTTGGTGAGAAAGGCGAAAGGTGACGTGAGTGAAGAATACATACACTCGTTGGCGGATTTAATGGTGAGCAAGGGACGGCCTCACTTCACAGTGGTGAGGTCGTATCTGGTGTCGGATGTGACTCGTGCTGGGTTTGGAAATGTTGACTTTGGGTGGGGAAAGGCTGTTTATGGAGGACCCGCCAAGGGAGGGGTTGGAGCCATACCTGGTGTTGCAAGCTTTTACATACCTTTTAAAAATGCTAAAGGAGAGGAAGGCTTGGTCATACCTGTTTGTTTACCATCTGAGGCCATGGAAAGGTTTCAAAAGGAGTTGGACACCGTGCTCACCCAACCTCCAAACTCTTCTACCTTCATTGTTTCTTCCTTGTAG 1368 0.5307 MDTSSSSLVFTVRRRKAELIAPAKPTPREVKLLSDIDDQDGLRFQIPVIQFYGHDPSMEGKDPVDVIRKAVAKTLVFYYPFAGRLREGRGRKLMVDCTGEGVLFIEADADVTLKQFGDALQPPFPCWEELLYDVPDSQGVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGVVQLMSAMGEIARGRKEPSVPPVWCRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFFGPSEVASIRRLLPPQHGQCSNFEVLTACLWRCRTIALQPEKDEEVRILCIVNARGKFEPPLPSGYYGNAFAFPVAVTSAGKLCENPLGYAVELVRKAKGDVSEEYIHSLADLMVSKGRPHFTVVRSYLVSDVTRAGFGNVDFGWGKAVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPSEAMERFQKELDTVLTQPPNSSTFIVSSL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2173 455 PANTHER - 9 445 - -
Aed10g2173 455 Pfam Transferase family 12 437 - -
Aed10g2173 455 Gene3D - 218 437 IPR023213 -
Aed10g2173 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 445 - -
Aed10g2173 455 Gene3D - 11 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2173 Aed-Chr10 25154692 25157663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2173 12 437 Monolignol Biosynthesis Gene Families AT5G48930 29.556 1.40e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2173 K19861 - gmx:100797017 823.542