Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2168 ATGGTGAAAATATCACTTGGTGGATACGATGATGGTGAAGGACCCAGCAACCGAACCCAGAAGCGGCGCAGGGAAGAGCATGATGATGATGAAGAAGAAGAGGAGCAACAACCGCAACGAAGCTTTGAAATGGTGGACCCTTCAATCGGAACTCAAGAGCACGAGGATCACGCTGCTCCACCCCATGCTAATGCGCCTGCAGCCACTATCAGGAATAGGTCCATTCCTATCTTCGTTACCGACACTGATGTCCTCGATTGTTGCATTTGCTATGAACCCTTGAGTTCCCCTGTATTCCAGTGTGAGAATGGACACATTGCTTGCTCCAATTGCTGTGTGAGACTCAGGAACAAGTGTCCCATGTGCTTAATGCCCATTGGCTATAACCGTTGCAGGGCTATTGAGAAGGTCTTGGATTCGATTAAAATGTCATGCCCCAATGCAAATTATGGCTGCAAAGAGACATTTAACTACAGCAAGAAAAATGAGCATGAGAAGGAATGCGTGTATCTACCATGTTCATGCCCACTTGCTGTTTGTGATTTCATTGCCTCATCCAAGGAGCTATGCCTCCACTTTAGCCACAGACATGTAGGCTCTGGAACACAGTTTGCATATGATAAGTTTTTCACTGTCATCTTCAGTACTAACCAGAAAACAATTGTTCTCCAAGAGAAAAATGATGGCAATCTGTTTGTTGTTCACAATAACCTTGAGCAACTGGGGAATGTAGTCCGCATTAGCTGCATTGGCCCCAAGCCCATGGCAGAGTTTCAGTATGAAGTCTTGGCTAGGCACCGAGGAAATGCGCTAATACTGCAATCTTTCACCAAGATTGTTCAAGGCCCATATGCTGATGCTCCATCAAGTACGTTCCTTTTGATTCCGTCTGGATTGTTTGGCTCTCCACCACAGCTGAAACTGGATATTCGCATCAAGTCACCACATTAA 951 0.4574 MVKISLGGYDDGEGPSNRTQKRRREEHDDDEEEEEQQPQRSFEMVDPSIGTQEHEDHAAPPHANAPAATIRNRSIPIFVTDTDVLDCCICYEPLSSPVFQCENGHIACSNCCVRLRNKCPMCLMPIGYNRCRAIEKVLDSIKMSCPNANYGCKETFNYSKKNEHEKECVYLPCSCPLAVCDFIASSKELCLHFSHRHVGSGTQFAYDKFFTVIFSTNQKTIVLQEKNDGNLFVVHNNLEQLGNVVRISCIGPKPMAEFQYEVLARHRGNALILQSFTKIVQGPYADAPSSTFLLIPSGLFGSPPQLKLDIRIKSPH 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2168 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 12 314 IPR044286 -
Aed10g2168 316 Coils Coil 17 37 - -
Aed10g2168 316 SUPERFAMILY TRAF domain-like 140 312 - -
Aed10g2168 316 Pfam Seven in absentia protein family 130 274 IPR018121 GO:0005737|GO:0006511|GO:0007275
Aed10g2168 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 12 314 - -
Aed10g2168 316 MobiDBLite consensus disorder prediction 1 44 - -
Aed10g2168 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 193 IPR013083 -
Aed10g2168 316 ProSiteProfiles Zinc finger RING-type profile. 87 122 IPR001841 -
Aed10g2168 316 ProSiteProfiles Zinc finger SIAH-type profile. 140 198 IPR013010 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2168 53 312 C3H Transcription Factor Family AT2G41980 27.338 9.89e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2168 K04506 - gmx:100778869 523.857