Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2166 ATGGCTACCATTTCTTCAACATGGTACTTGTTTCTTCCCATAATTTTATCGTTATGTCCCACAACAACACTATGTGGAACAGTGCTAGAAGACCTCAAAAACTTGCACCAACCACCAGATTTCAACTCTACAATTTTCTCCAACTGTCTCAAGAACCCCTCTCTTAGGTACTGCAGTTCCTCTCCCATGATGGACCTTGATGAAATATTCAAGTTCACTATTGTTGCAAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGTGTGGAGTCATTCCCCAAAGTTGATCTTAGAAACCGCCCAAACATTGCACCTCTTTATTTGTCCTTTGATTTCTTTTGGAAGTTTTGCCCCTTAAGCATTGTGTCCATTGATTTTTCCAACAATTCTATGAAGGGTGATTTTCCAACTGATGTTCTATATTGCAACCAAATTCAGTCTCTTGATTTAAGTATCAATGCATTTTCTGGTGACATTCCAATTCATAGTTTCTCTGCCTTAACCAAACTCACTTTTCTCAACCTCTCCTATAATTGCTTTTCAGAGAGTAAACTTTCTGATTCCCAATTCTTCAAAAGGTTTAACTTTTCTACTTTTCTTCATTCTGGTGCTATTTTGGATCAAAAAAGGTTTACACTAACGGCTGTTTTTTTATTGGTTGGATTTCCCATCCTTGTCACTTTGATGGTAATTTACTTGGTATGGCTTTGTTTCCAAAGGCCTGATTTTCTACCATGTAAACTTCAAAGAAGTAGGAGGTTTACACCGGCGATTCTAAAGGCAGCAACTGATGGTTTTTCAAATAAGTATTTGGTAGGAATGAGTGATGTTGTTTACATCTACAAAGGGGTCTTGAGAGATGGCACTGAAGTGAAAATTGAGATGTACTGGGATGATATACCAAGGGATAGTTACCGTAAATTTGTTGAAGAATGTAAGATTCTGTGTAAGTTAGAGCACAAGAACCTTGTTAGAGTTCTGGGGTGGTGTAGGAGCAGAAAATCCAGGGCTATTATAACTGAATGGACAAGAGAAAAGTATGTTGAAATGTGGCTATCTGGGTCAGGTCCACCATGGAATCATAGAGTGAAAGTGTTAATGGGAGTTGTAGAATGCATGTGTTATCTGCATGAAGAATGGCCTGAAGTTGACTATGAACTCAACACATGTAGTATATTATTGTCTGACAATTTGGAACCATTGATTTCAAGGTTCAAAGTTGGAGATCAAAACAGCAATCGAAGAAAGACATGTAGGTTTGGAGTGTTCTTGCTAGAGATGATACTAAGCAGAAAGGTTCAAGAGAAGTTTGATGGAGGTGATGATGGATTTATTAGGTACTTAAGAGCCCTTAATCCTGAAGATTTGCAGCAGATGATTGATGAGAGAATGGAATTCAAGATTAAAGTTATCAAAATAGATATTTGTACAGAAAAACAAAAGGCATTGAGCAATTGGGATGAAGAGTTAGGTAACATCCATTTTCGTTAA 1491 0.3749 MATISSTWYLFLPIILSLCPTTTLCGTVLEDLKNLHQPPDFNSTIFSNCLKNPSLRYCSSSPMMDLDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKFCPLSIVSIDFSNNSMKGDFPTDVLYCNQIQSLDLSINAFSGDIPIHSFSALTKLTFLNLSYNCFSESKLSDSQFFKRFNFSTFLHSGAILDQKRFTLTAVFLLVGFPILVTLMVIYLVWLCFQRPDFLPCKLQRSRRFTPAILKAATDGFSNKYLVGMSDVVYIYKGVLRDGTEVKIEMYWDDIPRDSYRKFVEECKILCKLEHKNLVRVLGWCRSRKSRAIITEWTREKYVEMWLSGSGPPWNHRVKVLMGVVECMCYLHEEWPEVDYELNTCSILLSDNLEPLISRFKVGDQNSNRRKTCRFGVFLLEMILSRKVQEKFDGGDDGFIRYLRALNPEDLQQMIDERMEFKIKVIKIDICTEKQKALSNWDEELGNIHFR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2166 496 Gene3D Phosphorylase Kinase; domain 1 241 342 - -
Aed10g2166 496 SUPERFAMILY Protein kinase-like (PK-like) 246 429 IPR011009 -
Aed10g2166 496 SUPERFAMILY L domain-like 81 204 - -
Aed10g2166 496 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 3 467 - -
Aed10g2166 496 Pfam Protein tyrosine and serine/threonine kinase 280 405 IPR001245 GO:0004672|GO:0006468
Aed10g2166 496 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 3 467 - -
Aed10g2166 496 ProSiteProfiles Protein kinase domain profile. 266 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2166 496 Gene3D Ribonuclease Inhibitor 28 218 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2166 Aed-Chr10 25109589 25111725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2166 123 465 Receptor kinase-like Gene Family AT5G45780 22.794 5.93e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed10g2166 PK_Tyr_Ser-Thr 8.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2166 - - gmx:100779045 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2166 10 25109589 25111725 Aed10g2166 10 25109589 25111725 ECH