Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g2159 | ATGGACAACTATCAAGGTGATTTAAGTGACATAATTCGTGCAAGTGGTGCATCATATGGCAGTTGCAGCACTGGAACTTCATCATCTGAAGCTGCTAATAATCCCTTCTCTCGTAATAATCACTTGCAGTTCTCTTCTGTTTTGGAAGGGTTCAATTTCAATAGCAACTTTGGTGATCCATTCTCAAACATGAGAGATCCCTTTCTACACGAGCTTGATTATTTGCCTGGCTCTGCCTACTTTAACAGCACAACAAGTTCTGGGGCATTGGAAGAAGCTACTTGTTTTGGTAGTAGCAGTAGTAGTAGTAATAGTTGTGTTTTGGCACAGAAGATTCTTGATGAGGATGATGATATGAGAATTAGGCCATGTAACAGCATGATGTCAAACATGATTCAGATCTCTCCCATTAATGATGATAAGTTACCCATCTCGCCAGTGGTGGATGCTTTGTCAAGGGCACTCAAGCCTTCTGGTGTCGTTTCAGGTCACAACATCATTGATTCAAAGACCTCTATGGATCATCATTTCTTGGTGGACAACACAGAAGAAGTTCAGATCTCACCTCCAAGGAATAATCCAGGTCTTAAGAGAAGAAAGAGTCAGGCAAAGAAATCGATTTGTGTTCCTGCACCAGCTGCACCAAATAGCAGACAAAGTGGCGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGCCAAAAACCCATTAAAGGTTCTCCATATCCAAGGAGTTACTATAGATGCAGCAGCTCAAAGGGCTGTCCTGCAAGGAAACAAGTTGAGAGGAGCAAAACAGACCCTAACATGTTGGTCATTACTTACACTTCTGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTTGCTGGTTCATCTCGATCGCAACCATCAAAAAACAACAACAACAACAACATTGATGCTTCAAAGAATTCAGAAACCACTCCCCAAAATGATGAAGAAGAGGAGGAGGAAGAGAGCAATAGTGACAGCAATAATGTGGAGAAGCAGCTTGAGATGGATGATGGAGAATTCAGTGACATTGGATATGGAGTCCCTCACAAGCCAATATCTTCTAAGGTGAAGAAGAACTACCAACAACTTGATCAAGGGTTGTTTGCAAAATTTGGAGAAAAAGAAAAGGATCACTCACTAAACCTATTGTCTCCACCACAAAGTTTTGATCATCATGACCAGCAAAGGGAATCCAACGCTTTAGATTCATTCCATTTCTTTGACCGGAGAGGTGATAACAGCACCAATTAA | 1275 | 0.418 | MDNYQGDLSDIIRASGASYGSCSTGTSSSEAANNPFSRNNHLQFSSVLEGFNFNSNFGDPFSNMRDPFLHELDYLPGSAYFNSTTSSGALEEATCFGSSSSSSNSCVLAQKILDEDDDMRIRPCNSMMSNMIQISPINDDKLPISPVVDALSRALKPSGVVSGHNIIDSKTSMDHHFLVDNTEEVQISPPRNNPGLKRRKSQAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRSYYRCSSSKGCPARKQVERSKTDPNMLVITYTSEHNHPWPTHRNALAGSSRSQPSKNNNNNNIDASKNSETTPQNDEEEEEEESNSDSNNVEKQLEMDDGEFSDIGYGVPHKPISSKVKKNYQQLDQGLFAKFGEKEKDHSLNLLSPPQSFDHHDQQRESNALDSFHFFDRRGDNSTN | 424 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g2159 | 424 | MobiDBLite | consensus disorder prediction | 398 | 424 | - | - | |
Aed10g2159 | 424 | SMART | WRKY_cls | 225 | 285 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g2159 | 424 | MobiDBLite | consensus disorder prediction | 269 | 316 | - | - | |
Aed10g2159 | 424 | ProSiteProfiles | WRKY domain profile. | 220 | 286 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g2159 | 424 | PANTHER | WRKY TRANSCRIPTION FACTOR 14-RELATED | 5 | 420 | - | - | |
Aed10g2159 | 424 | MobiDBLite | consensus disorder prediction | 386 | 424 | - | - | |
Aed10g2159 | 424 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 5 | 420 | IPR044810 | GO:0003700 | |
Aed10g2159 | 424 | Pfam | WRKY DNA -binding domain | 227 | 284 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g2159 | 424 | Gene3D | WRKY domain | 214 | 287 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g2159 | 424 | MobiDBLite | consensus disorder prediction | 242 | 337 | - | - | |
Aed10g2159 | 424 | MobiDBLite | consensus disorder prediction | 183 | 223 | - | - | |
Aed10g2159 | 424 | SUPERFAMILY | WRKY DNA-binding domain | 223 | 286 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g2159 | Aed-Chr10 | 25087635 | 25092534 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g2159 | 1 | 392 | WRKY Transcription Factor Family | AT2G34830 | 41.038 | 1.23e-77 | 246 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed10g2159 | WRKY | 1.3e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g2159 | - | - | gmx:102669548 | 560.451 |