Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2159 ATGGACAACTATCAAGGTGATTTAAGTGACATAATTCGTGCAAGTGGTGCATCATATGGCAGTTGCAGCACTGGAACTTCATCATCTGAAGCTGCTAATAATCCCTTCTCTCGTAATAATCACTTGCAGTTCTCTTCTGTTTTGGAAGGGTTCAATTTCAATAGCAACTTTGGTGATCCATTCTCAAACATGAGAGATCCCTTTCTACACGAGCTTGATTATTTGCCTGGCTCTGCCTACTTTAACAGCACAACAAGTTCTGGGGCATTGGAAGAAGCTACTTGTTTTGGTAGTAGCAGTAGTAGTAGTAATAGTTGTGTTTTGGCACAGAAGATTCTTGATGAGGATGATGATATGAGAATTAGGCCATGTAACAGCATGATGTCAAACATGATTCAGATCTCTCCCATTAATGATGATAAGTTACCCATCTCGCCAGTGGTGGATGCTTTGTCAAGGGCACTCAAGCCTTCTGGTGTCGTTTCAGGTCACAACATCATTGATTCAAAGACCTCTATGGATCATCATTTCTTGGTGGACAACACAGAAGAAGTTCAGATCTCACCTCCAAGGAATAATCCAGGTCTTAAGAGAAGAAAGAGTCAGGCAAAGAAATCGATTTGTGTTCCTGCACCAGCTGCACCAAATAGCAGACAAAGTGGCGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGCCAAAAACCCATTAAAGGTTCTCCATATCCAAGGAGTTACTATAGATGCAGCAGCTCAAAGGGCTGTCCTGCAAGGAAACAAGTTGAGAGGAGCAAAACAGACCCTAACATGTTGGTCATTACTTACACTTCTGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTTGCTGGTTCATCTCGATCGCAACCATCAAAAAACAACAACAACAACAACATTGATGCTTCAAAGAATTCAGAAACCACTCCCCAAAATGATGAAGAAGAGGAGGAGGAAGAGAGCAATAGTGACAGCAATAATGTGGAGAAGCAGCTTGAGATGGATGATGGAGAATTCAGTGACATTGGATATGGAGTCCCTCACAAGCCAATATCTTCTAAGGTGAAGAAGAACTACCAACAACTTGATCAAGGGTTGTTTGCAAAATTTGGAGAAAAAGAAAAGGATCACTCACTAAACCTATTGTCTCCACCACAAAGTTTTGATCATCATGACCAGCAAAGGGAATCCAACGCTTTAGATTCATTCCATTTCTTTGACCGGAGAGGTGATAACAGCACCAATTAA 1275 0.418 MDNYQGDLSDIIRASGASYGSCSTGTSSSEAANNPFSRNNHLQFSSVLEGFNFNSNFGDPFSNMRDPFLHELDYLPGSAYFNSTTSSGALEEATCFGSSSSSSNSCVLAQKILDEDDDMRIRPCNSMMSNMIQISPINDDKLPISPVVDALSRALKPSGVVSGHNIIDSKTSMDHHFLVDNTEEVQISPPRNNPGLKRRKSQAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRSYYRCSSSKGCPARKQVERSKTDPNMLVITYTSEHNHPWPTHRNALAGSSRSQPSKNNNNNNIDASKNSETTPQNDEEEEEEESNSDSNNVEKQLEMDDGEFSDIGYGVPHKPISSKVKKNYQQLDQGLFAKFGEKEKDHSLNLLSPPQSFDHHDQQRESNALDSFHFFDRRGDNSTN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2159 424 MobiDBLite consensus disorder prediction 398 424 - -
Aed10g2159 424 SMART WRKY_cls 225 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g2159 424 MobiDBLite consensus disorder prediction 269 316 - -
Aed10g2159 424 ProSiteProfiles WRKY domain profile. 220 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g2159 424 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 5 420 - -
Aed10g2159 424 MobiDBLite consensus disorder prediction 386 424 - -
Aed10g2159 424 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 420 IPR044810 GO:0003700
Aed10g2159 424 Pfam WRKY DNA -binding domain 227 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g2159 424 Gene3D WRKY domain 214 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g2159 424 MobiDBLite consensus disorder prediction 242 337 - -
Aed10g2159 424 MobiDBLite consensus disorder prediction 183 223 - -
Aed10g2159 424 SUPERFAMILY WRKY DNA-binding domain 223 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2159 Aed-Chr10 25087635 25092534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2159 1 392 WRKY Transcription Factor Family AT2G34830 41.038 1.23e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g2159 WRKY 1.3e-26 CL0274