Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2158 ATGGAACAGTACGAGAAGGTTGAGAAGATAGGCGAAGGAACCTACGGCGTCGTTTATAAGGGTCGTGACCGCGTCAGCAACGAGACCATCGCATTGAAGAAGATTCGCCTGGAGCACGAGGATGAGGGGGTTCCCAGCACTGCCATTCGAGAGATTTCTCTCTTGAAAGAAATGCAGCACAGGAACATTGTCAGGTTGCAGGATGTAGTACATGATGAGAAGAGTTTGTATCTGGTTTTTGAGTACCTTGACTTAGATCTAAAGAAGCACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGACAAATGTTCCTTTACCAAATTCTCTGTGGCATTGCTTATTGTCATTCTCATAGAGTTCTTCATCGAGACTTAAAACCACAGAATTTGTTGATAGATCGCAGCAATAATGCACTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGAATTCCTGTTAGGACATTTACACATGAGGTGGTAACACTGTGGTACAGAGCTCCGGAAATTTTGCTTGGATCCCGTCATTATTCTACCCCAGTTGATATTTGGTCAGTGGGATGCATATTTGCAGAGATGGTAAATCAACGACCTCTTTTCCCCGGGGACTCCGAGATTGATGAATTGTTTAAAATATTCAGAATCTTGGGTACACCAAATGAAGATACATGGCCTGGAGTGACATCATTGCCTGATTTTAAATCAGCCTTTCCCAAATGGCAGCCTAAGGACCTGAAAACTGTGGTTCCAAATCTTGAGCCATCTGGTCTTGATCTTCTTTCTAGCATGCTTTACTTGGATCCCAGCAAAAGAATTACTGCTAGGAGCGCTCTTGAGCATGAATACTTCAAAGACATTAAATTTGTACCATGA 879 0.4278 MEQYEKVEKIGEGTYGVVYKGRDRVSNETIALKKIRLEHEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHDEKSLYLVFEYLDLDLKKHMDSSPEFAKDPRQMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSNNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSAFPKWQPKDLKTVVPNLEPSGLDLLSSMLYLDPSKRITARSALEHEYFKDIKFVP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2158 292 SUPERFAMILY Protein kinase-like (PK-like) 1 288 IPR011009 -
Aed10g2158 292 PANTHER CELL DIVISION PROTEIN KINASE 1 289 - -
Aed10g2158 292 PANTHER CYCLIN-DEPENDENT KINASE A-2 1 289 - -
Aed10g2158 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Aed10g2158 292 CDD STKc_CDK1_CdkB_like 4 285 - -
Aed10g2158 292 Gene3D Transferase(Phosphotransferase) domain 1 87 290 - -
Aed10g2158 292 SMART serkin_6 4 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2158 292 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aed10g2158 292 ProSiteProfiles Protein kinase domain profile. 4 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2158 292 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Aed10g2158 292 Pfam Protein kinase domain 4 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2158 Aed-Chr10 25075834 25081084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2158 1 292 Core Cell Cycle Gene Families AT3G48750 83.333 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Aed10g2158 Pkinase 6.8e-80 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2158 K02206 - gmx:100127418 577.785