Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2155 GGAGAGGAGAACGAGAGGCAGCTGCAAAGCAGATTCGTTTTCAGCAGTTCCTTGCAGCAACCTGTTCGTACATACAAACGGAGCACGCCGCCGTCGCCGATGGACTGGAGGCGCCGGACGAAGACCAAGAAGCAACCTCCGCCGCCGCTTCAGCCTCGATTGGAGCGCCTCAACGCCAAAAAAGGCATTAATTACAAACCCCCACCCTCTCCTCCTTCACCTTCTTCTTCTTCTTCTTCCCACTTGGACCACCAAACCAGCTTCCGCCTCTTCGGCATCGACGGCGAATTCGAACGCATCTTCGAGTCCATGGGCCTGTCCGGCCCAGAAGACTTCTCCATCCCCACCGCTGACTGGGAGGCCTGCAAGGCCCGCGTCGCTTCCACCGGGCCCACCACCACCACTTCCCAGATAAACAAAGTTACCATCAATGCTACTGTTGCTCCCGTTGTTGTTTCTTCTTCCCCCTGGTCCTCCGGGGAGCACGACGTGGGCAGGGGCAGTGTCGGTAGATTGAGGCACGGCGAAAGGAGCGTGCTTTTCACCGATTCCGGTTCCTTCACTACTTCACACGACGACGACAGTGATATCGGCGGCGAGAGGGCTTGTTTGGCTTCTAATTCTTTAGCCGCCGCTGATGAGTTGGTTATTCCGTTTAATTCCTCCAACGAGTGGTTCAGACAGACTTTCGTCTCGTGGCAGAAAGGCGACGTCTTGGGAAATGGGTCCTTCGGAACTGTCTATGAAGGCTTCACCGATGATGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTACCCAGGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAACATAAAAACATAGTTCGATATTATGGCTCAGACAAGGACAATAGTAAACTATATATCTTCCTTGAGCTTATGTCAAAAGGGTCATTATCAAGTCTCTATCAAAAGTACCGTTTAAACGATTCTCAAGTTTCTGCATACACAAGGCAGATTTTAAGTGGCCTGAAGTATCTTCATGATCATGATGTGGTTCACAGGGACATCAAGTGTGCTAATATACTGGTTGATGTAAGTGGGGCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCGACGAAATTTAATGATGTTAAATCAAGCAAAGGCTCTCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAAGAACAAAGGTGGTTATGGGCTAGCAGCTGACATATGGAGCTTAGGGTGTACAGTTTTGGAGATGCTGACAAGGCTGCCTCCTTATTCTGATTTGGAAGGGATGCAAGCATTATTTCGGATTGGCAGGGGTGAACCTCCACCTATTCCTGAGAATTTATCTAGGGATGCCCGAAATTTCATTCTTGAATGCTTACAAGTTAACCCAAATGATCGCCCAACTGCAGCTCAGCTATCTGATCATCCATTTCTAAGGAGAACAACACTTCTATCTCCCTTAACTTTGGCTTCTCCACATAGGAATATCTATCGGTTATAA 1527 0.4846 GEENERQLQSRFVFSSSLQQPVRTYKRSTPPSPMDWRRRTKTKKQPPPPLQPRLERLNAKKGINYKPPPSPPSPSSSSSSHLDHQTSFRLFGIDGEFERIFESMGLSGPEDFSIPTADWEACKARVASTGPTTTTSQINKVTINATVAPVVVSSSPWSSGEHDVGRGSVGRLRHGERSVLFTDSGSFTTSHDDDSDIGGERACLASNSLAAADELVIPFNSSNEWFRQTFVSWQKGDVLGNGSFGTVYEGFTDDGFFFAVKEVSLLDEGTQGKQSIFQLQQEISLLSKFEHKNIVRYYGSDKDNSKLYIFLELMSKGSLSSLYQKYRLNDSQVSAYTRQILSGLKYLHDHDVVHRDIKCANILVDVSGAVKLADFGLAKATKFNDVKSSKGSPYWMAPEVVNLKNKGGYGLAADIWSLGCTVLEMLTRLPPYSDLEGMQALFRIGRGEPPPIPENLSRDARNFILECLQVNPNDRPTAAQLSDHPFLRRTTLLSPLTLASPHRNIYRL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2155 508 ProSitePatterns Protein kinases ATP-binding region signature. 239 261 IPR017441 GO:0005524
Aed10g2155 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Aed10g2155 508 Gene3D Transferase(Phosphotransferase) domain 1 232 502 - -
Aed10g2155 508 Pfam Protein kinase domain 234 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2155 508 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 51 139 - -
Aed10g2155 508 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 220 493 - -
Aed10g2155 508 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 51 139 - -
Aed10g2155 508 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 220 493 - -
Aed10g2155 508 MobiDBLite consensus disorder prediction 8 27 - -
Aed10g2155 508 ProSiteProfiles Protein kinase domain profile. 233 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2155 508 MobiDBLite consensus disorder prediction 1 84 - -
Aed10g2155 508 SUPERFAMILY Protein kinase-like (PK-like) 233 497 IPR011009 -
Aed10g2155 508 SMART serkin_6 233 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2155 Aed-Chr10 25047486 25052272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2155 230 489 MAP Kinase Kinase Kinase AT4G08500 68.846 9.70e-127 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed10g2155 Pkinase 2.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2155 - K13414 gmx:100820552 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2155 10 25047486 25052272 Aed4g2090 4 23987893 23989871 PCT