Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2148 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGACTCTTCATCTTCTTCGTCTATATCTTCCTTTTCGTGTCTTCTCTCCGATCTGCAACCCATGGACGACCTTCTCAAGTCCATAACCCCCAAGACAGTGGACGACGTCTGGAAGGAGATCGTTGCCGGCGCCGCCGCCTCCGACCCCCACCACCACTCTGCCGTCGTAGCCGACGACAATGCCAACGCCGGAGAGCCTCCCCGGATGACGCTGGAGGATTTTCTCACCAAGGCCGGCGCCGTCAGAGACGAAGATATCAGAGGGGCTCTTGCTCCTCCTCCTCCTCCGCCTCCGCCGCCTCCTCCGCTTCATGCTCCTTCTTCCTTCTCTCTCCCCGCCGAAGGCTCCTCCTCCTCCGTTGAGCCTTTCGGGAACGGCGTCGCCGGACCCTCGAATTCGGTTCAGAAAGGGAAGAGAAGGGCCGTTGAGGAACCGGTTGATAAAGCAACGCTTCAGAAACAGAGGAGGATGATTAAGAACAGAGAGTCTGCTGCTAGGTCCAGAGAACGCAAGCAGGCTTACACATCTGAGCTTGAGTATCTGGTTCACCAGCTAGAACAAGAGAATGTGCGGTTAATAAATGAAGAGGCTGAGATGAGAAGGCAGAGGAAAAAACAGCTCCTTGAGTCTATCATTCCAGTTGAGGTGATGTCTAAACCAAAGAAAAAACTTCGGAGAGTAAATTCAACACAGTCATTGTGA 747 0.5422 MASSKVVSTNPDLPRDSSSSSSISSFSCLLSDLQPMDDLLKSITPKTVDDVWKEIVAGAAASDPHHHSAVVADDNANAGEPPRMTLEDFLTKAGAVRDEDIRGALAPPPPPPPPPPPLHAPSSFSLPAEGSSSSVEPFGNGVAGPSNSVQKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENVRLINEEAEMRRQRKKQLLESIIPVEVMSKPKKKLRRVNSTQSL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2148 248 Coils Coil 190 220 - -
Aed10g2148 248 SUPERFAMILY Leucine zipper domain 168 217 IPR046347 GO:0003700|GO:0006355
Aed10g2148 248 CDD bZIP_plant_BZIP46 167 223 - -
Aed10g2148 248 MobiDBLite consensus disorder prediction 125 147 - -
Aed10g2148 248 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 246 IPR043452 GO:0003700|GO:0045893
Aed10g2148 248 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 217 IPR004827 GO:0003700|GO:0006355
Aed10g2148 248 Pfam bZIP transcription factor 164 220 IPR004827 GO:0003700|GO:0006355
Aed10g2148 248 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Aed10g2148 248 MobiDBLite consensus disorder prediction 1 24 - -
Aed10g2148 248 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
Aed10g2148 248 MobiDBLite consensus disorder prediction 101 163 - -
Aed10g2148 248 SMART brlzneu 163 227 IPR004827 GO:0003700|GO:0006355
Aed10g2148 248 PANTHER OS05G0437700 PROTEIN 3 246 - -
Aed10g2148 248 MobiDBLite consensus disorder prediction 104 122 - -
Aed10g2148 248 Gene3D - 166 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2148 Aed-Chr10 24991762 24995217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2148 46 246 bZIP Transcription Factor Family AT5G44080 40.376 8.28e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed10g2148 bZIP_1 4.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2148 K14432 - gmx:100101890 307.76