Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2142 ATGAAGAATACGTTGAAACCAGACATATTCCTAATGGTGTTTGTGCAGATTGCATTTGCTGCAGTGAATGTGATGTACAAGCTGGCCATAAATGATGGAATGAGCATGAGGGTAGCTTCTGCCTATCGCCTCGTTTTTGCTTCGGCTTTCACTGTCCCTATGGCTCTCATCTTTGATAGGGGAAGTTTATTTAGTAACCTTTACCTTGAAGCCATGGCTTTGACGTCAGCAACGTTTATGTTAGCCATGGTCAACCTTATTCCCGGCATTACTTTCATTATGGCCATATCCTTCGGATTCGAAAAGTTAAATTTGGCAGTAGCAGAAGGAAGGGCCAAATTGATAGGCACCATAATTGGAATTAGTGGAGCAATGCTGATGATCTTTTTCAAAGGCGTAGAAATTAATATTTGGTCGTCTAAAATCAACCTTATGCATCCACATGACCAGAACCAAAATGGGCATAATATTGTAGCATCTCACCACACTCAGTTTCGAAATAAATTGTTGGGTGTTCTATATGCCATAGCAAGCAGCTGCTGTTATTCTTTGTGGTACATCATTCAGGCTAAAATGAATGCAGAATATCCAAGCCCTAACTCAAGTGCAGCTTTAATGAGCATAATGGGAGCGATACAGGCCAATGTTTTTACTCTTTGTGTCGAAAGGGATTGGAACCAATGGAAGCTGGGTTTCAATATCAGGCTTCTTACTGTGGCTTATTCGGGAATGGTGGCCTCTGGAGTAGTGATTTTGATCATTTCTTGGTGCATAAAGAAGAGAGGCCCTCTATTTGTATCTGTTTTCAATCCTCTGCAGCTTTTGATAGTAGATATCGCTGCTTATTTAATGTTGGATGAGAAATTATATTTAGGAAGTGTGCTTGGAGCAATGATGATCGTATGCGGTCTATACACGGTGCTTTGGGGTAATTCCCAAGAATTGAAAAAGAAGTCTCAGTTAGTGCCATTAGGAATCACCAGAGGAGGAGAGTCTGAAAATCTTAGATCACAACAACCTTGA 1023 0.4076 MKNTLKPDIFLMVFVQIAFAAVNVMYKLAINDGMSMRVASAYRLVFASAFTVPMALIFDRGSLFSNLYLEAMALTSATFMLAMVNLIPGITFIMAISFGFEKLNLAVAEGRAKLIGTIIGISGAMLMIFFKGVEINIWSSKINLMHPHDQNQNGHNIVASHHTQFRNKLLGVLYAIASSCCYSLWYIIQAKMNAEYPSPNSSAALMSIMGAIQANVFTLCVERDWNQWKLGFNIRLLTVAYSGMVASGVVILIISWCIKKRGPLFVSVFNPLQLLIVDIAAYLMLDEKLYLGSVLGAMMIVCGLYTVLWGNSQELKKKSQLVPLGITRGGESENLRSQQP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2142 340 Pfam EamA-like transporter family 170 308 IPR000620 GO:0016020|GO:0016021
Aed10g2142 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 312 - -
Aed10g2142 340 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 8 332 - -
Aed10g2142 340 PANTHER WAT1-RELATED PROTEIN 8 332 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2142 Aed-Chr10 24958930 24962002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2142 8 317 Nodulin-like Gene Family AT1G68170 40.060 2.32e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2142 - - gmx:100803545 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2142 10 24958930 24962002 Aed4g2078 4 23926196 23929957 PCT