Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2140 ATGACCTTCATGGGAGCAATACAAGCCACAGTCTATGCTTTGTGTGTTGACAAAGATTGGAGTGAATGGGAGTTGACTTCAAAGATTAGGTTTTTCACAACACTTTTTACGGGAATTGTGACCACTGGATTAGCGAATATTGCCACTTCATGGTGTATACGGAAGAGAGGTCCATTGTATGCATCTGTTTTCAACCCACTTACCCTTGTGCTCGTGGCTTTTGCTAGTCCTCTGTTATTACAAGAGCACCTGTACTTAGGAAGTATAATTGGAGCAGTGATAATTGTGTGTGGTCTCTACTTTATGTTGTGGGGTAAGAGCAAAGAAATGAAAGCAGCAACTCACTTGGTGTCATCAGTTCGCTACGGAGAATTTGGAGTGACTGAGGTTGTTGTCGTGCCTGCGGTGACAACCAGAGGCGGACTTAGGTTAAGGTCTACGAGGGCCATGGCCGCCTCACATTTTTTTATTTTATAG 477 0.4382 MTFMGAIQATVYALCVDKDWSEWELTSKIRFFTTLFTGIVTTGLANIATSWCIRKRGPLYASVFNPLTLVLVAFASPLLLQEHLYLGSIIGAVIIVCGLYFMLWGKSKEMKAATHLVSSVRYGEFGVTEVVVVPAVTTRGGLRLRSTRAMAASHFFIL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2140 158 PANTHER WAT1-RELATED PROTEIN 1 124 IPR030184 GO:0016021|GO:0022857
Aed10g2140 158 PANTHER WAT1-RELATED PROTEIN 1 124 - -
Aed10g2140 158 SUPERFAMILY Multidrug resistance efflux transporter EmrE 27 108 - -
Aed10g2140 158 Pfam EamA-like transporter family 3 103 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2140 Aed-Chr10 24946096 24947062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2140 1 112 Nodulin-like Gene Family AT1G68170 48.214 6.48e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2140 - - gmx:100813274 194.126