Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2138 ATGGCTAATGCTACACCTAATGGTTCGGTGCCACACAACAACCACAACCATGCAAACAAAATTGATCAGAATAAGCAAACCCTAGGCATCATCGAAGATGATGACAGCAACAACATTGACTATTTACAAAGGGCACAGTGGCTTCGTCCAGCGGTTTTAGGAGCCAATGACGGCTTGGTTTCGGTTGCATCACTGATGATGGGTGTTGGAGCCGTTAAAAGAGATGCAAAAGCAATGCTACTTGCTGGTTTCGCAGGACTAGTAGCTGGGGCTTGTGGCATGGCAATAGGAGAGTTTGTTGCAGTGTACACGCAGTACGAGGTTGAGGTAGGTCAAATGAAGAGAGACATCATGAACATGAGAGACTTGGAGATGGAGATGGAGAAGAGAACATTGCCGAATCCGTTGCAAGCTACTTTGGCTTCTGCATTATCATTTTCTATTGGTGCAATGGTGCCTCTATTTTCTGCTGCTTTCATAGCAAATTACAGGACTAGGGTTATTGTTGTTGTGGCTATGGCTAGTTTGGCCTTGGTGGTTTTTGGACATCTCGGGGCTCATCTGGGAAATACTCCTAAGATGAAATCTTGTGTAAGGTTCCTTCTTGGTGGATGGCTAGCCATGGCTATCACTTTTGGGTTAACTAAATTAGTGGGTGCTAGCGCTTTAGTCTAA 675 0.4504 MANATPNGSVPHNNHNHANKIDQNKQTLGIIEDDDSNNIDYLQRAQWLRPAVLGANDGLVSVASLMMGVGAVKRDAKAMLLAGFAGLVAGACGMAIGEFVAVYTQYEVEVGQMKRDIMNMRDLEMEMEKRTLPNPLQATLASALSFSIGAMVPLFSAAFIANYRTRVIVVVAMASLALVVFGHLGAHLGNTPKMKSCVRFLLGGWLAMAITFGLTKLVGASALV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2138 224 CDD Nodulin-21 46 193 - -
Aed10g2138 224 MobiDBLite consensus disorder prediction 1 22 - -
Aed10g2138 224 Pfam VIT family 48 117 IPR008217 GO:0005384|GO:0030026
Aed10g2138 224 Pfam VIT family 117 215 IPR008217 GO:0005384|GO:0030026
Aed10g2138 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 220 IPR008217 GO:0005384|GO:0030026
Aed10g2138 224 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2138 Aed-Chr10 24938616 24939290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2138 31 223 Nodulin-like Gene Family AT3G43660 62.176 1.05e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2138 K22736 - gmx:547974 315.849