Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2137 ATGGGTGTAGGAGCTGTAAAAACAGATGAAAAGGCTATGCTACTTGCTGGTTTTGCAGGGTTGGTTGCAGGGACTTGTGGCATGGCAATAGGAGAGTTTGTTGCTGTGTGCACTCAGTATGAAGTTGAAGTAGGTCAAATGAAGAGAGAGATCAAAGACTTGGAGATGGGGGTGGAGAAAAGAGCATTGCCTAATCCATTGCAAGCTACTATGGCATCTGCAGTGTCCTTTTCTGTAGGTGCATTGGTGCCTCTACTCTCAGCTGCTTTCATTGAAAGTTACAGGAATAGGGTTATTATGATTGTGGCTATGGCTAGTTTGGCTTTGGTGGTTTTTGGGAGGGTTGTGGCTCACCTAGGAAAAACTCCTAAGATCAAATCTTGTGTTAGGTTCCTTCTTGGAGGATGGATAGCCATGGCTATAACTTTTGGCTTGACCAAATTACTTGGTGCTAAAGCTTTAGATAATGAATGA 474 0.4346 MGVGAVKTDEKAMLLAGFAGLVAGTCGMAIGEFVAVCTQYEVEVGQMKREIKDLEMGVEKRALPNPLQATMASAVSFSVGALVPLLSAAFIESYRNRVIMIVAMASLALVVFGRVVAHLGKTPKIKSCVRFLLGGWIAMAITFGLTKLLGAKALDNE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2137 157 Pfam VIT family 1 54 IPR008217 GO:0005384|GO:0030026
Aed10g2137 157 Pfam VIT family 54 146 IPR008217 GO:0005384|GO:0030026
Aed10g2137 157 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 151 IPR008217 GO:0005384|GO:0030026
Aed10g2137 157 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2137 Aed-Chr10 24936017 24936490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2137 1 154 Nodulin-like Gene Family AT3G43660 58.442 2.98e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2137 K22736 - gmx:100803012 276.559