Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2124 ATGCATGAGCAATTTCTTTGTGGAATAAGCACCGACAACCAATCTGATGAGTGTGATGGAAGGTTCAAGGTTGTTTCTCAACTCTTGGTCCACCACACCATAGCCCAGAAATGGTGCATAGATATATTAAGGTATACTCCAACAGGTCGGTCACAACCCAATTCAATTCGACCAATACCTAAACCATACTCTTCTGCCACGTGGATGATGCTCATTGATGATATCAGCATGAAGTGTCATGATATTCATAACCCAAGTAGAGCTTTGGCAGAGGGAAAGCAATGGTACTACTACAGCAGAAGGACACAGAATAGGGTGAGTGGCAATGGTTATTGGATGCCAATGGGAATGGAAGAAGCAGTGGTTTCAAGCTCAAGCAACAAGAGAGTTGGCATGAAGAAGTACTATGTGTTCCATGTTGGAGAAGCCCCTGATGGTGGCAGCAACACTACCAATTGGATAATGCAAGAGTATCGTCTATTAGATTCTTCTGCTTCCTCTAGCAGATCATCATCCAGAAGAAGATCACAACCAAAACTGGTTAGTGACCATAGTAAATGGGTGATATGTCGAGTTTATGAACGGGATAGCGATGATGACAATGATGGGGATGGTGATGGAACAGAACTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGAAGAAATAAGTTTACCAAATTAG 693 0.4214 MHEQFLCGISTDNQSDECDGRFKVVSQLLVHHTIAQKWCIDILRYTPTGRSQPNSIRPIPKPYSSATWMMLIDDISMKCHDIHNPSRALAEGKQWYYYSRRTQNRVSGNGYWMPMGMEEAVVSSSSNKRVGMKKYYVFHVGEAPDGGSNTTNWIMQEYRLLDSSASSSRSSSRRRSQPKLVSDHSKWVICRVYERDSDDDNDGDGDGTELSCLDEVFLSLDDLEEISLPN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2124 230 PANTHER NAC TRANSCRIPTION FACTOR 56 71 227 - -
Aed10g2124 230 SUPERFAMILY NAC domain 85 194 IPR036093 GO:0003677|GO:0006355
Aed10g2124 230 Pfam No apical meristem (NAM) protein 78 160 IPR003441 GO:0003677|GO:0006355
Aed10g2124 230 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 71 227 - -
Aed10g2124 230 Gene3D NAC domain 42 199 IPR036093 GO:0003677|GO:0006355
Aed10g2124 230 ProSiteProfiles NAC domain profile. 39 195 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2124 Aed-Chr10 24873532 24876846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2124 85 197 NAC Transcription Factor Family AT3G15500 39.669 4.92e-21 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed10g2124 NAM 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2124 - - gmx:100813096 235.343