Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2123 ATGATCATGCATGCATTTGGCATCCTTTTGGTTGTTCTTTACTCTCTCTTGAGCTTTGTATCCTCGGAAATCAATTTTGTAAAATATGGGTTTATGCAAGCAGGCTTGAAAATTGATGGAGCTTCTTATGTGAGGCCAAATGGTGTACTTACATTGACAAATGATTCTGCAAAAATCCTTGGTCATGCATTCTATCCATCTCCTTTGCCATTCAAATCTAGCAAAAACAAATCCATTGTTGCAACCTTTAGCACCACCTTTGTGTTTTCCATTGTTCCCAAGTACCCAGAACTTGGTGGGCATGGCTTCGCATTCGTTCTATTATCTACCAACGAACCAAAAGGATGCCTCATGAATCAATATTTAGGCCTCCCAAATGTGACAAGTGATCTAGAATTTTCAACCCGGTTCCTAGCCATAGAGTTTGATGGGATACAGAACCTTGATCTTCTTGACATCAATGATAATCATGTGGGGATAGACATATCCAGCCTCATCTCTAACATATCTAAGTCAGCAGCATACTACTTATCAGATCACAGCAAGAACATTCCCATTAGTCTGAAGAGTGGAAAACCCGTTCAAGCATGGGTTGATTACAATGAAGGGGAGATGTTGATGAATGTTACAGTTTCTCCTTTTGGCATGCCAAAGCCATATGTTCCTTTGATATCATTTCCCATAGACCTATCCTTGGTGTTTAATGACTACATGTATGCAGGCTTTTCTGCTTCCAACGGTGTGCTGGTAGCTGAGAATAATATACATGGTTGGAGCTTTAAAATTGGAGAAGCAGCACAAGAGCTAGATAAATCAGCTGTTCCACTTATTGGGTCAAGTACTTCTAGTAAGGTGGTGCACAAAAGAGACTTTGCAGTAGGTATCACTTTAGCAAGTGCAACTCTTTTTATCTTGACAATTATAGGAGCTCTTCATGTCCTGCGCAGATTAAGAAATGGGGATGAGATTTTAGAAGATTGGGAGCTTGAATATGCTGCCCATAAATTTAAATATTCTGAGCTCCATTCAGCTACAGGAAAGTTCGGGGACAGAAACCTTGTTGGGTATGGAGGATTTGGTAAAGTCTACAGAGGAGTAATCCCTAGCACAGGACTAGAAGTAGCTGTAAAGCGAGTAGCTCCAGATTCAAGGCAGGGAATCAGAGAATTTGTTGCAGAAATAACAAGCATGACACAACTAAAGCATAGAAATTTGGTGCAATTACATGGGTGGTGCAGGAAGAAGGATGAACTCCTCGTTACTGGGAAGGCAAGAACAAACACAGATGTATATGGGTATGGCGTACTCATTTTGGAAGTAGCATGTGGAAGGATGCCAATAGAGCCCCAAAAGAATCCGGAGGAACTGGTATTAGTGGACTGGGTTAGAGAACTACATCACCAAGGGAAGATCAGCAGGGCTATTGACCCCAGTTTAGATGAGTATGACAAAGATGAAGCTCAGCTTGTGCTTAGTCTTGGGTTGCTTTGTGCTCATCCCAATCCTGATTACAGGCCTACCATGAGAAGGATTGTCCAGTTCCTTCTGGGAGAAACCATCCTTCCTCCACTTCCTCCTGACATTCACTGTGAAGGTCCAAGAGCAATAATAAAATGCCCAAACAACTTTGCAGATGATTCAGGCCCTTCAAGTTCTATGGTGTCTTCATCAAAATATTGCAGTCTTACATGCATTGATGAGGTGGTCTCAGCTACTGAAGTCACTGGGCTGACTTCATAG 1740 0.4184 MIMHAFGILLVVLYSLLSFVSSEINFVKYGFMQAGLKIDGASYVRPNGVLTLTNDSAKILGHAFYPSPLPFKSSKNKSIVATFSTTFVFSIVPKYPELGGHGFAFVLLSTNEPKGCLMNQYLGLPNVTSDLEFSTRFLAIEFDGIQNLDLLDINDNHVGIDISSLISNISKSAAYYLSDHSKNIPISLKSGKPVQAWVDYNEGEMLMNVTVSPFGMPKPYVPLISFPIDLSLVFNDYMYAGFSASNGVLVAENNIHGWSFKIGEAAQELDKSAVPLIGSSTSSKVVHKRDFAVGITLASATLFILTIIGALHVLRRLRNGDEILEDWELEYAAHKFKYSELHSATGKFGDRNLVGYGGFGKVYRGVIPSTGLEVAVKRVAPDSRQGIREFVAEITSMTQLKHRNLVQLHGWCRKKDELLVTGKARTNTDVYGYGVLILEVACGRMPIEPQKNPEELVLVDWVRELHHQGKISRAIDPSLDEYDKDEAQLVLSLGLLCAHPNPDYRPTMRRIVQFLLGETILPPLPPDIHCEGPRAIIKCPNNFADDSGPSSSMVSSSKYCSLTCIDEVVSATEVTGLTS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2123 579 Gene3D - 21 281 - -
Aed10g2123 579 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.2-LIKE 59 420 - -
Aed10g2123 579 PANTHER - 59 420 - -
Aed10g2123 579 SUPERFAMILY Protein kinase-like (PK-like) 335 538 IPR011009 -
Aed10g2123 579 Pfam Protein tyrosine and serine/threonine kinase 353 420 IPR001245 GO:0004672|GO:0006468
Aed10g2123 579 Gene3D Phosphorylase Kinase; domain 1 332 418 - -
Aed10g2123 579 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Aed10g2123 579 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.2-LIKE 417 553 - -
Aed10g2123 579 Gene3D Transferase(Phosphotransferase) domain 1 419 517 - -
Aed10g2123 579 ProSiteProfiles Protein kinase domain profile. 348 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2123 579 PANTHER - 417 553 - -
Aed10g2123 579 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Aed10g2123 579 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 264 IPR013320 -
Aed10g2123 579 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2123 Aed-Chr10 24865619 24867673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2123 417 526 Receptor kinase-like Gene Family AT3G55550 46.847 2.67e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed10g2123 Lectin_legB 3.2e-63 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2123 - - gmx:100801966 761.14