Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2120 ATGGCCAACATACAGAGAGTGATTTCATCTTTCATGTCTTTGTTTCTTATTCTTTGGATGTTTGTGGTGCTTGTTGACTTAGTGCTTAAGGTTTCTGGCAACGCAGAAGTTGATGCCCTGTCTGCATTTAAAGACAGTCTGATTGATCCTGCCGACGCTCTTCGTAATTGGGATGCTACCCTTGTCGATCCTTGCACATGGTTTCATGTTGAATGCGAAAATAGCGTGGTGATTAGTGTTAATCTTGGAAATGCAAAGCTTTCTGGTCCACTTGTTCCACAGCTTGGTCGGCTCTCAAATTTGAAATCCTTAGAACTTTATAGTAATAATATAACTGGGGAAATCCCAGTCGAGCTTGGAAGTTTGACAAACTTGGAGACCTTGGATCTTTACATGAACAACATTACTGGTTCCATTCCAGACAACTTGGCCAACCTTAAAAAACTACGTTTCCTGCGTCTCAATAATAACAGCTTGTCGGGAAAGATTCCTGGGGGTTTGACCACTATTAATTCACTGCAAGTGCTTTTTGACAATAATCGTTTGAATCAAATAACTCCAGTTATACCAGCTGCTATACCACAACAAAATCCTTCAGATAATGGTATCAGCGCCATTGGAGCCATTGCTGGAGGAGTTTCTGTGGGTGCTGCACTGTTGTTTGCATCCCCAGTAATTGCACTTGTTTATTGGAATAGACGGAAGCCACCGGATGATTACGTTGATGTCGCAGCTGAGGAGGACCCTGAAGTTAGCCTTGGTCAGCTGAAAAAGTTTTCTTTGCATGAATTGCGAATTGCAACAGATAACTTTAGTAACATGCTTGGTAAAGGTGGATTTGGCAAGGTTTATAAAGGACGTTTAGCAAATGGTGATAATGTAGCAGTAAAAAGACTTAACTATGAACGCAGCCGGGGCGAGGATAAGCAATTTCAAATGGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCCTGATTGGTTTTTGTAACACACCTTCTGAACGCTTGCTTGTGTATCCTTTAATGGTTAATGGAAGTGTAGAATCACGTTTACGAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTTGATTTAGCAGGACTCGCCAGGGATGAGAATATCATGTTGCTTGATTGGGTGAAAGCAGTAGTGAAAGACAAGAAGTTGGATACACTGATGGATGCAAGTTTACTGGGAAATTGTGATATAGGGGAAGTAGAAGAGTTAATCCGAGTGGCCTTGATATGCACACAGAAGTCTCCCTATGAAAGACCAAAGATGTCTGAAGTGGTGAGAATGTTGGAAGGTGAAGGTTTTGAAGAAAAGTGGGATCAATGGCTGAATATGAAAGATGATGTACAAAATTTCTTCTTCAATCTCAGCACTTCTTATGACTCAAATCCAAATATTCAACCAGACTCAAATCCAAATATTCAACCAGATGTTCTGTCAGGTCCTAGATGA 1509 0.4102 MANIQRVISSFMSLFLILWMFVVLVDLVLKVSGNAEVDALSAFKDSLIDPADALRNWDATLVDPCTWFHVECENSVVISVNLGNAKLSGPLVPQLGRLSNLKSLELYSNNITGEIPVELGSLTNLETLDLYMNNITGSIPDNLANLKKLRFLRLNNNSLSGKIPGGLTTINSLQVLFDNNRLNQITPVIPAAIPQQNPSDNGISAIGAIAGGVSVGAALLFASPVIALVYWNRRKPPDDYVDVAAEEDPEVSLGQLKKFSLHELRIATDNFSNMLGKGGFGKVYKGRLANGDNVAVKRLNYERSRGEDKQFQMEVEMISMAVHRNLLRLIGFCNTPSERLLVYPLMVNGSVESRLREKTDVFGYGVMLLELITGQRAFDLAGLARDENIMLLDWVKAVVKDKKLDTLMDASLLGNCDIGEVEELIRVALICTQKSPYERPKMSEVVRMLEGEGFEEKWDQWLNMKDDVQNFFFNLSTSYDSNPNIQPDSNPNIQPDVLSGPR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2120 502 SUPERFAMILY Protein kinase-like (PK-like) 256 482 IPR011009 -
Aed10g2120 502 ProSiteProfiles Leucine-rich repeat profile. 124 147 IPR001611 GO:0005515
Aed10g2120 502 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 358 - -
Aed10g2120 502 MobiDBLite consensus disorder prediction 482 496 - -
Aed10g2120 502 ProSiteProfiles Protein kinase domain profile. 269 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2120 502 Pfam Protein tyrosine and serine/threonine kinase 271 358 IPR001245 GO:0004672|GO:0006468
Aed10g2120 502 MobiDBLite consensus disorder prediction 482 502 - -
Aed10g2120 502 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 356 502 - -
Aed10g2120 502 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Aed10g2120 502 Gene3D Ribonuclease Inhibitor 33 205 IPR032675 -
Aed10g2120 502 Gene3D Transferase(Phosphotransferase) domain 1 341 469 - -
Aed10g2120 502 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Aed10g2120 502 Gene3D Phosphorylase Kinase; domain 1 240 340 - -
Aed10g2120 502 PANTHER BNAA08G11770D PROTEIN 356 502 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aed10g2120 502 PANTHER BNAA08G11770D PROTEIN 14 358 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aed10g2120 502 SUPERFAMILY L domain-like 35 193 - -
Aed10g2120 502 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2120 Aed-Chr10 24826748 24832410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2120 357 502 Receptor kinase-like Gene Family AT4G33430 59.184 8.62e-46 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aed10g2120 PK_Tyr_Ser-Thr 1.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2120 K13416 - gmx:100804708 503.442