Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2119 ATGGCCAACATGGAGCGAGTGATTTCATCTTTCATGTCTTTGTTTCCTCTTTGGGCAATTTTGGTGCTCAAGGTTTCTGGCAACACAGAAGGTGATGCCCTGGGTGCATTGAAGAACAGTATGAGTGACCCTAACAATGTTCTTCAAAGTTGGGATTCTACCCTTGTCACTCCTTGCACATGGTTTCATGTTACTTGCAACAATGAAAATAGCGTGACCCGTGTTGATCTTGGAAATGCAAACCTTTCTGGTCAACTTGTTTCACAGCTTGGTCAACTCCCAAATTTGCAATACTTGGAACTTTATAGTAATAATATAACTGGGAAAATCCCAGATGAGCTTGGAAGTTTAACAAACTTGGTGAGCTTGGATCTTTACTTGAACAACATTACTGGTCCCATTCCGGACACCTTGGCCAACCTTAAAAAACTACGTTTCCTGCGTCTCAACAATAACACCTTGTCAGGGAAGATCCCTTGGCGTTTGACCACTGTTACGTCACTTCAAGTGCTTGATTTATCGAACAACAACTTATCAGGAGATATTCCAGTCAATGGTAATAGTAACCGTGCTATTGGAATAATTGCTGGAGGAGTTGCTGTGGGTGTTGCACTGTTAATTGCAGCCCCAGTAATTGCACTTGTTTATTGGAAAAGAAGGAAGCCACAGGACTTTTTCTTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCACTGCGTGAACTGCAAGTTGCAACAGATACCTTTAACAACAAAAACATTCTTGGTAAAGGTGGATTTGGCAAGGTTTACAAAGGACGCTTAACAAATGGTGATCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGCACTCAGGGTGGGGAGATGCAATTCCAAACTGAAGTGGAAATGATCAGCATGGCTGTTCATCGAAATTTGCTTCGCCTGCGTGGTTTCTGTATGACACCTACTGAACGTGTGCTTGTGTATCCTTTCATGGCTAATGGAAGTGTAGCTTCATGCTTACGAGATCGTCCGGAATCACAAGCACCACTAGAATGGCCAAAAAGAAAGAATATTGCTCTAGGATCTGCTAGGGGGCTTGCTTATTTGCACGATCATTGTGACCCAAAGATTATTCATCGTGATGTAAAAGCTGCTAACATATTGTTGGATGAGGACTTTGAAGCAGTTGTGAAAGCACTTCTGAAAGACAAGAGGTTGGAGACACTGGTGGATGCAGATTTAGAGGGAAAATATGAGGATGCAGAAGTAGAGGAGGTAATCCAAGTGGCCTTGCTATGCACACAAAGCTCCCCTTTGGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAGGGTGAAGGTTTGGCAGAAAAATGGGATAAATGGTGGCAGAAAGAGGATATGATCAAACAAAACTTTGACCCCTCCAATCTCCACAATGGTTATTGGCCATTATTAGACTCAAGTTCAGCTATTCCACCAGATGAACTGTCAGGTCCTAGATGA 1518 0.4269 MANMERVISSFMSLFPLWAILVLKVSGNTEGDALGALKNSMSDPNNVLQSWDSTLVTPCTWFHVTCNNENSVTRVDLGNANLSGQLVSQLGQLPNLQYLELYSNNITGKIPDELGSLTNLVSLDLYLNNITGPIPDTLANLKKLRFLRLNNNTLSGKIPWRLTTVTSLQVLDLSNNNLSGDIPVNGNSNRAIGIIAGGVAVGVALLIAAPVIALVYWKRRKPQDFFFDVAAEEDPEVHLGQLKRFSLRELQVATDTFNNKNILGKGGFGKVYKGRLTNGDLVAVKRLKEERTQGGEMQFQTEVEMISMAVHRNLLRLRGFCMTPTERVLVYPFMANGSVASCLRDRPESQAPLEWPKRKNIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEDFEAVVKALLKDKRLETLVDADLEGKYEDAEVEEVIQVALLCTQSSPLERPKMSEVVRMLEGEGLAEKWDKWWQKEDMIKQNFDPSNLHNGYWPLLDSSSAIPPDELSGPR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2119 505 ProSiteProfiles Protein kinase domain profile. 257 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2119 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Aed10g2119 505 SMART serkin_6 257 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2119 505 PANTHER BNAA08G11770D PROTEIN 186 400 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aed10g2119 505 Pfam Leucine Rich Repeat 167 183 IPR001611 GO:0005515
Aed10g2119 505 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 400 505 - -
Aed10g2119 505 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 18 187 - -
Aed10g2119 505 PANTHER BNAA08G11770D PROTEIN 400 505 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aed10g2119 505 PANTHER BNAA08G11770D PROTEIN 18 187 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aed10g2119 505 ProSiteProfiles Leucine-rich repeat profile. 167 189 IPR001611 GO:0005515
Aed10g2119 505 SUPERFAMILY Protein kinase-like (PK-like) 237 455 IPR011009 -
Aed10g2119 505 Pfam Protein kinase domain 258 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2119 505 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 186 400 - -
Aed10g2119 505 ProSitePatterns Protein kinases ATP-binding region signature. 263 285 IPR017441 GO:0005524
Aed10g2119 505 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Aed10g2119 505 Gene3D Transferase(Phosphotransferase) domain 1 399 475 - -
Aed10g2119 505 Gene3D Transferase(Phosphotransferase) domain 1 334 398 - -
Aed10g2119 505 Gene3D Ribonuclease Inhibitor 26 194 IPR032675 -
Aed10g2119 505 SUPERFAMILY L domain-like 30 185 - -
Aed10g2119 505 Gene3D Phosphorylase Kinase; domain 1 226 333 - -
Aed10g2119 505 Pfam Leucine rich repeat 94 154 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2119 Aed-Chr10 24817187 24823217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2119 400 505 Receptor kinase-like Gene Family AT4G33430 62.037 4.87e-34 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aed10g2119 Pkinase 9.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2119 K13416 - gmx:100804180 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2119 10 24817187 24823217 Aed4g2061 4 23810647 23817900 PCT