Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2116 ATGGATGTTTTATCATTGAGCTCAAGTTCAAGCCTAAGCATGTCGTCCAAGAAGCCCTTTCAATCTCGTGGTAAACAACAACAACATAATCAAAGATGTTCCAATGTGAAGTTTAGCACTGTTGTTTCATGCAGAGCCACAACGTTAACCAAAGAAAACTTGTACAAAGTGTTGTCTGTGAGTCCAGGAAGTGCAACAATGGATGAGATCAAAAGGGCTTATAGGTCAATGGCTCTTCAGTACCACCCTGACGTGTGCCATGACCCTTCCATGAAAGAGGAGTCAACGAGGATGTTTGTTCAGCTAAACGCAGCGTACGAGACCTTGTCTAATCCAAGGCTTCGAGAACAGTATGATAGTGAATTGGGTTTGAGAACCACAGTGATGAGTAGTGTTAGTGTTCATGAACATCATGAGAGATGGGAAAGTGCTACTTTTCAGGAGCAAGTGATTGAGTTGAAGACAAGGTCTCGTAGACGTATGGGACAAAAGGGTGGATCATCGGGTACCAGAATGAGAGACAGAAATTAA 531 0.4294 MDVLSLSSSSSLSMSSKKPFQSRGKQQQHNQRCSNVKFSTVVSCRATTLTKENLYKVLSVSPGSATMDEIKRAYRSMALQYHPDVCHDPSMKEESTRMFVQLNAAYETLSNPRLREQYDSELGLRTTVMSSVSVHEHHERWESATFQEQVIELKTRSRRRMGQKGGSSGTRMRDRN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2116 176 ProSitePatterns Nt-dnaJ domain signature. 99 118 IPR018253 -
Aed10g2116 176 SMART dnaj_3 52 114 IPR001623 -
Aed10g2116 176 PRINTS DnaJ domain signature 56 74 IPR001623 -
Aed10g2116 176 PRINTS DnaJ domain signature 74 89 IPR001623 -
Aed10g2116 176 PRINTS DnaJ domain signature 94 114 IPR001623 -
Aed10g2116 176 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 5 176 - -
Aed10g2116 176 CDD DnaJ 53 111 IPR001623 -
Aed10g2116 176 Gene3D DnaJ domain 39 148 IPR036869 -
Aed10g2116 176 ProSiteProfiles dnaJ domain profile. 53 122 IPR001623 -
Aed10g2116 176 SUPERFAMILY Chaperone J-domain 21 118 IPR036869 -
Aed10g2116 176 MobiDBLite consensus disorder prediction 1 32 - -
Aed10g2116 176 Pfam DnaJ domain 53 119 IPR001623 -
Aed10g2116 176 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 5 176 - -
Aed10g2116 176 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2116 Aed-Chr10 24806653 24807183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2116 55 120 C2H2 Transcription Factor Family AT1G74250 45.588 1.16e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2116 - - gmx:100811478 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2116 10 24806653 24807183 Aed4g2056 4 23773411 23778118 PCT