Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2114 ATGGCAGCTGCAACATCTAGTGCTGTGTTAAATGGTTTAGGATCTCATTTCTTGTGTGGGGGAAAGAGGAGCCATACCCTGCTTTCTGCTGGCATTGGAAGCAAAGTTGGTGCTGCTGTTGCTCCCAAAAGACTTATTGTGGCAGTTGCTGCTGCACCAAAGAAGTCATGGATCCCTGCTGTCAAAGGTGGTGGCAATCTCCTTGACCCAGAATGGCTTGATGGCTCGCTACCAGGTGACTATGGCTTTGACCCACTAGGACTAGGAAAGGACCCGGCATTCCTGAAATGGTACAGAGAAGCTGAACTCATTCATGGGAGGTGGGCAATGGCTGCAGTTCTGGGCATCTTCATTGGGCAGGCATGGAGTGGAGTTCCATGGTTTGAGGCCGGAGCTGATCCTAATGCAATTGCTCCTTTCTCCTTTGGTTCTCTTTTGGGTACCCAGTTGTTCCTAATGGGGTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCAGATTCTCAGTCAGTGGAATGGGCAACTCCATGGTCAAGAACTGCTGAGAACTTTGTCAACTCTACTGGTGATCAAGGCTACCCTGGGGGCAAATTCTTTGACCCTTTGGGATTTGCTGGCACAACCAAGGATGGTGTTTACATTCCAGATTCAGACAAGCTAGAGAGACTTAAGTTGGCTGAGATTAAGCATGCTAGGCTTGCAATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGTCAGGGCAAGACACCCCTTGGTGCTCTTGGTTTGTAA 777 0.4916 MAAATSSAVLNGLGSHFLCGGKRSHTLLSAGIGSKVGAAVAPKRLIVAVAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLFLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFVNSTGDQGYPGGKFFDPLGFAGTTKDGVYIPDSDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2114 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 3 258 - -
Aed10g2114 258 SUPERFAMILY Chlorophyll a-b binding protein 64 258 - -
Aed10g2114 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 258 IPR001344 GO:0009765|GO:0016020
Aed10g2114 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Aed10g2114 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2114 Aed-Chr10 24794530 24796428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2114 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 83.398 1.38e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2114 K08917 - gmx:100783223 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2114 10 24794530 24796428 Aed4g2053 4 23760861 23762620 PCT