Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2100 ATGGATTGTGCGTTCTCCGTCACCACCACGACGCACGTGGCGCTGTTCAGAGCGCTCCACCGTCATTTCCACGGAGCTCCTCAACGCGCCTTGCTCCGCCGCAACCTCAAATGCCTCGTTGCTTCCTACAGCAACAACTGCTGCCGCATTCCGTGTTCTTTCGCTTCCGCGCCGTCGCCGCCGTCCTCGCTCCGCGGACTGCTCCGTCGAACGCCGTGCCGTCCGCGCTGCATTTCGAGCTCCGCCGCCTCCTATGCTTCCTCTGCCGGCGGTGGAAATGGCGGCGCGGGAACCGGCGACGGCGGCGGAGGTGGAGGCTCTGGCGGCGAGTCTGGAGATGCTAATCTGAAATTGGTTGGAGACGCGACTCAGGAGCTTTCGGCGCTTTCGCCCGATGTTATCATTCTCGATGTTTCCGGAATGGTTTGCGGGGGATGTGCTGCGAATGTGAAAAGGATACTGGAAAGTCGAGCACTTGCAGAGCATTTAACTAGTTGTGGTTTTAATTCTAGCCTTCGAGACTCAACATTAGTCAATTTCCTCAAAATTTTTGAAAGGAAGATGGAGGAAAGACAGAGACAATTAAGAGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTATGTGCTGTCTGTCTTGTTGGGCATTTCTCTCATTTCTTTGCAGCAAAGGCACCATGGATCCATGCATTTCACTCCATTGGGTTTCATCTATCCTTGTCTTTGTTTACATTGCTTGGTCCTGGCCGCCAACTTATCCTTGATGGCTTGAAAAGCCTTCTTAAAAGGACGCCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTATCATCATTTACAGTCAGTTCATTTGCTGCCTTACTGCCCAAATTGGGTTGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTCGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGTTTATTGCCACCAAAAGCTCGCCTTCTTGTGAACAATGGGGAAACAGAGGTTGGCTCGGTTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCAAATTGTTGTATTACCTGGAGATCGTATTCCAGCTGATGGAGTTGTGAGATCTGGTAGAAGCACTGTAGATGAATCAAGTTTCACTGGTGAACCACTGCCTGTAACTAAAGTAGCTGGGAGTGAGGTAGCAGCTGGGAGTATAAATCTTAATGGAACTCTTACATTAGAAGTGCGGAGACCAGGTGGTGAGACTGCTATGGCAGACATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTGCAGCGGTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTGATGGCAGCCTCTGCTGCCACATTCACATTTTGGAGTCTGTATGGCACACACATTTTACCTCCTGCTTTATATCAAGGAAGTGCAGTTTCATTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCAGTGCTGGTTGGAACATCTTTGGGAGCTAAAAGAGGATTGCTTCTGCGTGGTGGACACATCCTAGAGAAGTTTGCCATGGTAAACACTGTTGTGTTTGACAAAACAGGGACCCTCACGGTTGGTAGACCTGTTGTGACAAACATTGTCACTCCTACTTGCATAAAAAATGCAATTTCAAGCCAAACTGAAGAAAATGCTTTGTCTGATGTTGAAGTTCTAAGGTTAGCAGCTGCGGTAGAATCAAATTCAGTACATCCAGTTGGTAAAGCAATTGTGGACGCTGCTCAGGCTGCTAATTGTCATAATGCTAAGGTAAAAGATGGAACATTCCTGGAGGAACCTGGATCTGGTGCTGTGGCAACAATTGATAACAAAAAGGTTTCTGTTGGGACATTGGAATGGATTAACAGGCATGGAATTATTAACAGTATACATCAAGAAGTGGAGAAGAGTAATAACCAATCCTTTGTCTATGTTGGAGTTGATGATACTTTAGTTGGCCTGATTTATTTTGAAGATGAGATAAGGGAAGATGCAAGAGAGGTTGTTGACAGATTGTCAAAGCAAAATATAGATGTATACATGCTATCAGGAGACAAGAGAAACGCTGCTGAGCATGTTGCTTCCCTTGTTGGAATTCCCAAAGAGAAGGTGCTATCTGAAGTAAAACCAGATGAGAAAAAGAAGTTCATAAATGAACTACAGAAAGATAAGAACATTGTAGCAATGGTTGGTGATGGAATTAACGATGCTGCTGCCTTGGCTTCTTCACATGTTGGTATTGCATTAGGTGGAGGTGTTGGGGCTGCTAGTGAGGTGTCTTCTATTGTATTAATGCGCAACCAGCTCTCACAGGTAGGAATTCCAATTGCAGCTGGAGTGTTATTTCCCATAAATGGGACTGTGCTGACTCCATCAATTGCAGGGGCTCTCATGGGGTTCAGTTCCATTGGTGTAATGACTAACTCGTTACTTTTGAGATTCAAATTCTCCTCAAAGCAGAAACAAATAATACATCGCACATCACCAAAGACCAAAATCCATGTGACACAAAACCAGAAAACAGACCACCCTTATTAG 2628 0.4604 MDCAFSVTTTTHVALFRALHRHFHGAPQRALLRRNLKCLVASYSNNCCRIPCSFASAPSPPSSLRGLLRRTPCRPRCISSSAASYASSAGGGNGGAGTGDGGGGGGSGGESGDANLKLVGDATQELSALSPDVIILDVSGMVCGGCAANVKRILESRALAEHLTSCGFNSSLRDSTLVNFLKIFERKMEERQRQLRESGRELAVSWALCAVCLVGHFSHFFAAKAPWIHAFHSIGFHLSLSLFTLLGPGRQLILDGLKSLLKRTPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSLLPPKARLLVNNGETEVGSVVEVPSDSLSVGDQIVVLPGDRIPADGVVRSGRSTVDESSFTGEPLPVTKVAGSEVAAGSINLNGTLTLEVRRPGGETAMADIVRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFTFWSLYGTHILPPALYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGHILEKFAMVNTVVFDKTGTLTVGRPVVTNIVTPTCIKNAISSQTEENALSDVEVLRLAAAVESNSVHPVGKAIVDAAQAANCHNAKVKDGTFLEEPGSGAVATIDNKKVSVGTLEWINRHGIINSIHQEVEKSNNQSFVYVGVDDTLVGLIYFEDEIREDAREVVDRLSKQNIDVYMLSGDKRNAAEHVASLVGIPKEKVLSEVKPDEKKKFINELQKDKNIVAMVGDGINDAAALASSHVGIALGGGVGAASEVSSIVLMRNQLSQVGIPIAAGVLFPINGTVLTPSIAGALMGFSSIGVMTNSLLLRFKFSSKQKQIIHRTSPKTKIHVTQNQKTDHPY 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2100 875 Gene3D - 558 691 IPR023299 GO:0000166
Aed10g2100 875 Gene3D - 538 802 IPR023214 -
Aed10g2100 875 SUPERFAMILY Calcium ATPase, transmembrane domain M 298 566 IPR023298 -
Aed10g2100 875 Gene3D - 317 440 - -
Aed10g2100 875 ProSiteProfiles Heavy-metal-associated domain profile. 133 156 IPR006121 GO:0046872
Aed10g2100 875 Pfam haloacid dehalogenase-like hydrolase 543 772 - -
Aed10g2100 875 MobiDBLite consensus disorder prediction 83 109 - -
Aed10g2100 875 Pfam E1-E2 ATPase 331 527 - -
Aed10g2100 875 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 305 568 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed10g2100 875 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 592 802 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed10g2100 875 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 267 802 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aed10g2100 875 PANTHER ATP7, ISOFORM B 125 844 - -
Aed10g2100 875 SFLD C1.7: P-type atpase like 530 802 - -
Aed10g2100 875 PRINTS P-type cation-transporting ATPase superfamily signature 547 561 - -
Aed10g2100 875 PRINTS P-type cation-transporting ATPase superfamily signature 760 779 - -
Aed10g2100 875 PRINTS P-type cation-transporting ATPase superfamily signature 783 795 - -
Aed10g2100 875 PRINTS P-type cation-transporting ATPase superfamily signature 705 715 - -
Aed10g2100 875 PRINTS P-type cation-transporting ATPase superfamily signature 683 694 - -
Aed10g2100 875 PRINTS P-type cation-transporting ATPase superfamily signature 386 400 - -
Aed10g2100 875 PRINTS Copper-transporting ATPase signature 300 319 - -
Aed10g2100 875 PRINTS Copper-transporting ATPase signature 252 271 - -
Aed10g2100 875 PRINTS Copper-transporting ATPase signature 737 754 - -
Aed10g2100 875 PRINTS Copper-transporting ATPase signature 530 545 - -
Aed10g2100 875 CDD P-type_ATPase_HM 202 841 - -
Aed10g2100 875 ProSitePatterns E1-E2 ATPases phosphorylation site. 549 555 IPR018303 -
Aed10g2100 875 SUPERFAMILY HAD-like 535 801 IPR036412 -
Aed10g2100 875 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 249 797 - -
Aed10g2100 875 SFLD p-type atpase 530 802 IPR044492 -
Aed10g2100 875 SUPERFAMILY Calcium ATPase, transduction domain A 348 436 IPR008250 -
Aed10g2100 875 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2100 Aed-Chr10 24708497 24719376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2100 249 843 Primary Pumps ATPases AT1G63440 38.365 6.41e-115 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2100 K17686 - gmx:100796210 1451.8