Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2095 ATGGATAGTCTTTGTTGCTTCAGCTCTGTCAGTCAGGTGGTTGGAGGGCGTTCTTCATGCAACTCTGGCAAAGGCAAGAGCAGTCAGGCCTCAGTCAAGTATGGCTATAGCCTAGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCAAAGCTTGTCCAGTTCAAAGGGCGAGAGCTTGGGCTTTTTGCTATATACGATGGACACCTGGGTGACAGTGTACCATCCTATTTACAAAAGCATCTGTTTTCTAACATCTTGAAGGAAGAGGACTTCTGGAATGATCCATTCATGTCCATTTCTAATGCGTACGAGACAACAGATCAGGCAATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCAATTCTCATAAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCTGTTGTGTCGAGGGGAGGGGTGGCTGGACAGATGTCAACTGATCATGAACCCAATACTGAGCGGGGCAGCATCGAGACCAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTAGCAGTTTCTCGAGCCTTTGGAGACAAAAACCTCAAAACACACTTGCGATCTGATCCTGACATTCAGTATACTGATATTACCCCAGATGTTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAAGCTGTTGATATTGCAAGAAGGATAAAGGATCCACAAAAGGCAGCAAAACAACTAGCCACTGAGGCATTGAACAGAGACAGTAAGGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGGTTGA 849 0.4535 MDSLCCFSSVSQVVGGRSSCNSGKGKSSQASVKYGYSLVKGKANHPMEDYHVAKLVQFKGRELGLFAIYDGHLGDSVPSYLQKHLFSNILKEEDFWNDPFMSISNAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVVSRGGVAGQMSTDHEPNTERGSIETRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYTDITPDVELLILASDGLWKVMANQEAVDIARRIKDPQKAAKQLATEALNRDSKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2095 282 SMART PP2C_4 25 278 IPR001932 -
Aed10g2095 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Aed10g2095 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Aed10g2095 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Aed10g2095 282 MobiDBLite consensus disorder prediction 156 177 - -
Aed10g2095 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Aed10g2095 282 Gene3D - 17 282 IPR036457 -
Aed10g2095 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Aed10g2095 282 CDD PP2Cc 32 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2095 Aed-Chr10 24674732 24681045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2095 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.732 2.19e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2095 K17506 - gmx:100801722 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2095 10 24674732 24681045 Aed4g2041 4 23690547 23693967 PCT