Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2088 ATGAAGTACTTGAAAGAACAAAGAGGAATTAGTAGGGAAAGTGGATATACATTTCTCTCCATTGTTGAAAACAAAGATGTTATATTCATCAAACCTTCAAAATCCACTCCTACAACATTTCTTTCACTGTCTAGCATTGACAATGCTCCTGATAACGATTTCTTCATGCAAACCCTTCATGTGTATCAATCCGCAGATCACAATTCCACTAATACTACGAAACTTGACCCTGCAAAAGTGATCAAAGAGGCTCTCTCAGTGGCTCTCTTTTACTATTATCCTCTTGCAGGAAAGCTAGTAAGAGATGATGCTGATGGAAAATTCAGAATCAACTGCAACTCTGAAGGAGTTCCATTCATAGAGGCTTTTTGTGATTGCAACCTCTCATCTCTTCATTATCTAGATGGCAACTACGCTGAAATCGGAAAACACTTTGGAATCGATTTTCCTTCTGAAGATGAATTTGGAAACCAATATCCTTTGGTTTTGAAGGTGACTAAATTCCTCTGTGGGGGTTTCATTCTTGCAGTGGGGTTGTCCCACGCTATTTTTGACGGGACTGGGCAATCTCAGTTCTTACGCGCAGTGGCTGAACTTGCAAGTGGAAAAACTGAACCCTCTATGAAGCCTGTGTGGGAAAGAGAGAGACTAGTGGGAACATTTACTACTCAACCCATGCAAAATCCCATGGACAATGACTCTTTTGCAGTTTCACCGTTTCTACCAACCAATGAATACTCGCATGAATGCTCCAAGGTAGACAGTGAGAGCATAACAAGACTCAAAATGAGTTTGAGTAACATTAATAAAAAAAGTATTAAGAAAAAAGGGTTTACAACCTTTGAAACCCTAGCTGCGTACATTTGGAGGTCAAGAGCTAGAGCCATGAAACTGAGTTACTATAGAAAAACATTGTTGGTTATGACAGTAGGGCTGAGACCATACTTGTTGGAACCTTTGCCGGATGGATATTACGGGAATGCCATCATGGATGCATTTGTTACGTTAACAGTGAGGGAGCTGAACGAAAGACCACTCTTGGAAGTTGTGAAACTCATAAGAGAGAGCTTAGAAGCTTCTTTCAGCCATGATTATATTAGACACGCAATTGACAGCATGCATACAAAGCCAATGGAATACAATTATGAAAGAGGTGGGGTAACATTTATAACGGATTGGAGACATTTGGGTATGTTGGAAAATGTTGATTTTGGGTGGAAGGAGCCATTGAATACGATGCCAGTCCCATCAGACATGTATGGATTAGTGGGTTTGTGCAATATCTTGCCTCCAACTAAATTGGATCCTTCAAATGTGAGTGGAGGAGCTAGGGTTTACGTATCCCTGCCTAGTGCCGCCATGCCCAAGTTCAAAGAAGAGATGAAAGCTCTAACTACTCTGCAGAAGATAAATTCCAAAATTTAA 1425 0.4049 MKYLKEQRGISRESGYTFLSIVENKDVIFIKPSKSTPTTFLSLSSIDNAPDNDFFMQTLHVYQSADHNSTNTTKLDPAKVIKEALSVALFYYYPLAGKLVRDDADGKFRINCNSEGVPFIEAFCDCNLSSLHYLDGNYAEIGKHFGIDFPSEDEFGNQYPLVLKVTKFLCGGFILAVGLSHAIFDGTGQSQFLRAVAELASGKTEPSMKPVWERERLVGTFTTQPMQNPMDNDSFAVSPFLPTNEYSHECSKVDSESITRLKMSLSNINKKSIKKKGFTTFETLAAYIWRSRARAMKLSYYRKTLLVMTVGLRPYLLEPLPDGYYGNAIMDAFVTLTVRELNERPLLEVVKLIRESLEASFSHDYIRHAIDSMHTKPMEYNYERGGVTFITDWRHLGMLENVDFGWKEPLNTMPVPSDMYGLVGLCNILPPTKLDPSNVSGGARVYVSLPSAAMPKFKEEMKALTTLQKINSKI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2088 474 PANTHER ACYL TRANSFERASE 4 21 465 - -
Aed10g2088 474 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 21 465 - -
Aed10g2088 474 Gene3D - 20 236 IPR023213 -
Aed10g2088 474 Pfam Transferase family 25 463 - -
Aed10g2088 474 Gene3D - 238 461 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2088 Aed-Chr10 24630780 24632204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2088 25 459 Monolignol Biosynthesis Gene Families AT5G48930 27.609 6.21e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2088 K20240 - gmx:100783730 753.436