Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2084 ATGGCTTCTCTTCTTCCATCTTATAATTCATCTTCTCCTAGTGATTATGAAATCAAACCTAACTCATCAAGATTTGAGGCCACTACTACTTTGGAGATTGAAGAATCATATAGTGCTCCAAAACCAAAAGGGTCCAAAAGAGGAGAAACTAATTCAGGTTGGATCAATAATTATGAGAGAGATCACCAAGAGATGATGGGTGTGTGCTTGACTTGGAAGGATGTGTGGGTGACTGCTTCCTTGGGAAGGAATGGAAGCAAATCAATTCTTGAGGGTCTAAGTGGTTATGCAAAACCAGGGCAACTCTTAGCCATAATGGGTCCTTCTGGCTCTGGAAAGTCTACACTTCTTGATGCCTTAGCAGGGAGATTAGGTTCCAACACAAGGCAAACGGGGGAGATTTTGATCAACGGGAAGAAACAAGCACTGGCATATGGAACCTCAGCATATGTGACACAAGATGATACATTACTGACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTGCCAGATACCATGTCCAAGAAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATTCCATTAACACAAGAATTGGAGGGTGGGGTGTTAAGGGAATAAGTGGGGGCCAAAAGAGGAGAGTGAGCATCTGCATAGAGATCCTAACACGACCAGGGCTTCTCTTCCTTGATGAACCAACTAGTGGACTTGACAGTGCTGCTTCCTATTATGTCATGAAAAGAATTGCTACACTTGATAAAAAAGATGACGTTCACAGAACTGTTATTGCCTCGATTCATCAACCTAGTAGTGAAGTTTTTCAACTATTCGACAACCTTTGTCTTTTGTCTTCTGGTAGAACTGTTTACTTTGGACCTGCTTCTGCTGCTAAGGAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTGAAAACCATAAACAAGGATTTCGATCAGGACCCTGAGTTGAATTTAGGAGGAGCTGAAACATTACCCACCGGAGAAGCAATTCGTATCCTTGTAAACTCATACAAGTCATCTGAAATGAATCAAGAAGTTCAGAAAGAAGTGGCAGTACTAACTGAAAAGGACACCAGTTCAACAAACAAGAAGAGAAGGCATGCTAGCTTCCTTAATCAGTGCATTTCTCTAACCAAAAGATCGTCCATTAACATGTATCGTGATCTAGGCTATTACTGGTTACGTCTTGCCATTTATATTGCATTGGCTATAAGTTTAGCCACTATTTTCTATGATCTGGGTACAAGTTTTCGCTCAATTCAGGATAGAGGTTCATTTCTCATGTTTGTGTCTTCATTCATGACTTTCATGACCATTGGCGGATTCCCTTCCTTTGTTGAGGATATGAAGGTGTTTGAACGTGAGAGGCTAAATGGACACTATAGTGTGACTGCATTCGTAATTGGGAACACATTTTCAGCTATACCCTACTTGTTGTTGGTTTCAATAATTCCTGGAGCTATAGCATACTACCTTCCTGGTCTTCAGAAAGACTTTGATCACTTTGCATACTTCATTTGTGCTCTCTTTGCATGTCTCATGTTAGTAGAGAGCCTCATGATGATAGTTGCAAGCATTGTCCCCAACTTTCTAATGGGTATCATAACCGGTGCTGGAATTCAAGGAATCATGATCTTAAGTGGTGGCTTCTTTAGGTTACCAAGTGATCTTCCTGAGCCATTTTGGAAATACCCTATGTTCTATTTTGCCTTCCATAGATATGCTTACCAAGGAATGTTCAAAAATGAGTTTGAAGGACTAAGGTTTGATACAAATAATAATGTTGGTGGTGGGGGCTACATTAGTGGTGAAGAGGTTCTAAGAGACACGTGGCAAGTGAACATGAGTTATTCAAAATGGGTTGATCTTGGAATCTTGCTGGGGATGATTGTTCTGTACCGTTTTCTCTTTTTGATTAACATCAAGATTACTGAGAAGGTTAAGCCAACCGTTGCGTCGTTCATGGCATCAAGGTCGTCTCCTAAGAGAACAATGCAGATCATGCAGAATCCCAATGCCACTCCTTTACAAGAACTTCAAGTTATATAA 2115 0.4071 MASLLPSYNSSSPSDYEIKPNSSRFEATTTLEIEESYSAPKPKGSKRGETNSGWINNYERDHQEMMGVCLTWKDVWVTASLGRNGSKSILEGLSGYAKPGQLLAIMGPSGSGKSTLLDALAGRLGSNTRQTGEILINGKKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKKEKKERADFTIREMGLQDSINTRIGGWGVKGISGGQKRRVSICIEILTRPGLLFLDEPTSGLDSAASYYVMKRIATLDKKDDVHRTVIASIHQPSSEVFQLFDNLCLLSSGRTVYFGPASAAKEFFASNGFPCPPLMNPSDHLLKTINKDFDQDPELNLGGAETLPTGEAIRILVNSYKSSEMNQEVQKEVAVLTEKDTSSTNKKRRHASFLNQCISLTKRSSINMYRDLGYYWLRLAIYIALAISLATIFYDLGTSFRSIQDRGSFLMFVSSFMTFMTIGGFPSFVEDMKVFERERLNGHYSVTAFVIGNTFSAIPYLLLVSIIPGAIAYYLPGLQKDFDHFAYFICALFACLMLVESLMMIVASIVPNFLMGIITGAGIQGIMILSGGFFRLPSDLPEPFWKYPMFYFAFHRYAYQGMFKNEFEGLRFDTNNNVGGGGYISGEEVLRDTWQVNMSYSKWVDLGILLGMIVLYRFLFLINIKITEKVKPTVASFMASRSSPKRTMQIMQNPNATPLQELQVI 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2084 704 MobiDBLite consensus disorder prediction 1 35 - -
Aed10g2084 704 Pfam ABC transporter 91 241 IPR003439 GO:0005524
Aed10g2084 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 307 IPR027417 -
Aed10g2084 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 316 IPR003439 GO:0005524
Aed10g2084 704 MobiDBLite consensus disorder prediction 1 52 - -
Aed10g2084 704 Gene3D - 56 311 IPR027417 -
Aed10g2084 704 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524
Aed10g2084 704 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 60 698 - -
Aed10g2084 704 SMART AAA_5 99 293 IPR003593 -
Aed10g2084 704 Pfam ABC-2 type transporter 395 606 IPR013525 GO:0016020|GO:0140359
Aed10g2084 704 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 60 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2084 Aed-Chr10 24593324 24597880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2084 89 277 Calmodulin-binding Proteins AT2G36910 29.744 8.61e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2084 K05681 - gmx:100813462 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2084 10 24593324 24597880 Aed10g2084 10 24593324 24597880 ECH