Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2083 ATGGCATGCCTTCATGATGAGTCTGCAGTTTCATCATCTGCTCCTACATTATGTTCTTATGAAACTAAACCCAGCTCATCAAAATCATCAACACCCCAGCAAAGTAGTGTCATAGACATTGAATCCACCACACTGGAAATGGAAGCTTTTAGAGGTCCAAGAAAGATCAATGAAGAAGAAATTAATGGTATGATATGCCTGACATGGAAGGATTTGTGGGTGACAGCTTCAAATAGAAAGAGTGGAAGCAAATCAATTCTTCAAGGTCTAACTGGTTATGCTAAACCAGGGCAACTCCTGGCAATAATGGGTCCTTCTGGCTGTGGCAAATCTACTCTTCTTGATACTTTAGCAGGGAGATTAGGTTCAAACACAAGGCAAACCGGGGAGATTCTGATCAATGGTCACAAACAGGCACTATCTTATGGAACCTCAGCATATGTGACACAAGATGATACATTACTGACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTGCCAGACACCATGTCCAAGAAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATTCTATTAACACAAGAATTGGAGGGTGGGGTGTTAAGGGAATAAGTGGGGGCCAGAAGAGGAGAGTGAGCATCTGCATAGAGATCTTAACACGCCCTAAACTTTTGTTTCTTGATGAACCAACTAGTGGACTTGACAGTGCAGCTTCCTATTATGTCATGAGAAGAATTGCTACCTTGGCTCAGAATGACCACGTTCAGAGAACTATTATTGCATCAATCCATCAGCCTAGTAGTGAAGTTTTTCAACTCTTCAATAACCTTTGTCTTCTGTCTTCAGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCAAGTGAGTTTTTTGCTTCAAATGATTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTAAAAACTATAAACATGGATTTTGATCAGGACATTGAGGTAGGTTTAGCAGGAACTAGAAACATACCCACAGAAGAAGTAATCTACATCCTTGTGAACTCATACAAATCATCTGAAAGGAACCAAGAAGTTCAAAATGAAGTAGCTGTACTATCTAAGAAGGTAACCAAATTATTGGATATGAAGAGAGGGAATGCAGACTTCCTTAATCAATGCTTAATTCTTACCAAAAGGTCGTTCATTAACATGTATCGTGATCTAGGCTATTATTGGTTACGCCTTGTCATATATATTGCATTGGCCATAACTTTAGCCACTGTTTTCTATGATTTGGGCACAAGTTATGGGTCAATTAAGGATCGAGGCTCGCTTGTTGCATTTATAAATGGATTCATTACTTTCATGACAATTGGTGGATTCCCTTCCTTTGTGGAAGTCATGAAGGTATATCAACGAGAAAGACAAAATGGGCATTATGGTGTCACAACATTTGTGATTGGGAACACCTTGTCATCTATCCCATACTTGCTATTGGTTACATTCATTCCTGGGGCTATATCGTATTACCTCCCTGGTCTTCAGAATGGATTCGAGCACTTTCTGTATTTCATTTGTGTTTTATTTTCAAGTCTCATGTTAGTGGAGAGCCTCATGATGATAGTTGCGAGCATTGTTCCCAACTATTTAATGGGAATCATAACTGGTTCTGGAATTCAAGGAATCATGCTTCTACTAAGTGGCTTCTTCAAGTTGCCAAATGATATTCCTAAGCCAGTTTGGAAATACCCTTTACACTATGTTGCTTTTCATACGTATGCCAACCAAGGAATGTTCAAGAACGAGTATAAAGGACTAAGATTTGAGAAAGATCAAGTTGGAGGCTCATCACACGGTTACACAAGTGGTGAAGATATTTTGAGATATATATGGCAAGTTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGATAGGGATGATTGTTTTGTATCGAGTTTTGTTTTTGGTTATCATCAAGATTAAAGAGAAGATGGAGCCTTGTTTTGTATCATTATCTTGCATGTCAGCATCTCCAAAGCGATCAACAATACAAGTTATGGAAAACCCCAATGCCACTCCTTTACATTGA 2097 0.392 MACLHDESAVSSSAPTLCSYETKPSSSKSSTPQQSSVIDIESTTLEMEAFRGPRKINEEEINGMICLTWKDLWVTASNRKSGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQALSYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKKEKKERADFTIREMGLQDSINTRIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMRRIATLAQNDHVQRTIIASIHQPSSEVFQLFNNLCLLSSGKTVYFGPASAASEFFASNDFPCPPLMNPSDHLLKTINMDFDQDIEVGLAGTRNIPTEEVIYILVNSYKSSERNQEVQNEVAVLSKKVTKLLDMKRGNADFLNQCLILTKRSFINMYRDLGYYWLRLVIYIALAITLATVFYDLGTSYGSIKDRGSLVAFINGFITFMTIGGFPSFVEVMKVYQRERQNGHYGVTTFVIGNTLSSIPYLLLVTFIPGAISYYLPGLQNGFEHFLYFICVLFSSLMLVESLMMIVASIVPNYLMGIITGSGIQGIMLLLSGFFKLPNDIPKPVWKYPLHYVAFHTYANQGMFKNEYKGLRFEKDQVGGSSHGYTSGEDILRYIWQVDMSYSKWVDLAILIGMIVLYRVLFLVIIKIKEKMEPCFVSLSCMSASPKRSTIQVMENPNATPLH 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2083 698 SMART AAA_5 96 285 IPR003593 -
Aed10g2083 698 MobiDBLite consensus disorder prediction 9 36 - -
Aed10g2083 698 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 698 - -
Aed10g2083 698 Coils Coil 362 382 - -
Aed10g2083 698 Pfam ABC-2 type transporter 392 603 IPR013525 GO:0016020|GO:0140359
Aed10g2083 698 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 698 - -
Aed10g2083 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 302 IPR027417 -
Aed10g2083 698 MobiDBLite consensus disorder prediction 1 36 - -
Aed10g2083 698 Pfam ABC-2 type transporter 270 374 IPR043926 GO:0140359
Aed10g2083 698 Pfam ABC transporter 88 238 IPR003439 GO:0005524
Aed10g2083 698 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 313 IPR003439 GO:0005524
Aed10g2083 698 Gene3D - 67 312 IPR027417 -
Aed10g2083 698 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2083 Aed-Chr10 24582485 24586532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2083 86 248 Calmodulin-binding Proteins AT2G36910 30.178 5.65e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2083 K05681 - gmx:100794527 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2083 10 24582485 24586532 Aed10g2083 10 24582485 24586532 ECH