Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2061 ATGGACGGCAGCGGCGGGATTCGAGAGGAGGCGGAGCGGTGGCTGTACACGGCGAACAAGCTCCTGAGCGCGCGTGACCTCCACGGCGCGCGTTCATTCGCGATCCGCGCGCGCGAAACGGACCCAACTTACGAGGTCTCCCAGCACCTCCTGACGGTGATTGACACGCTCCTCGCCGGCGAGTCGCGGATCAATGACCACCATAGGGACTGGTACGGGATCCTCCAAATTCTCCGTTACACCACTAACATGGACCACATTGCCGCCCAGTATCGCCGCCTCGCGCTCCTCCTCGACCCTCTCCGCAACATATTCGCCTTCGCCGGCCACGCCTTTTCGCTTGTCAACGATGCCTGGTCCGTACTCTCCAATTCCGCCAAGAAAGCCATGTACGACAGCGACCTCCGGCTTCTCACCACTCCCGCGCCGCCGCCGCCGCAACCTCGGCAGCCCCAGCCTCAACCCACGCCCAGGAGAAACCCTAAATCGAGGGACGATTTGTCCGAGTCGACTCGCCCGAATCGTCCCGATCCCGCCGAGTCGACTCGCACCACCGAAACCGATACCGGAACGAGTTTCTGGACCTCGTGCCCTTACTGTTATGTTCTGTACGAATATCCAAAGGTGTATGAGGAGTGTACCTTAAGGTGTCAGAGTTGTCGGAGAGGGTTTCATGCGGTGGTGATACGGTCGCCTCCGCCGTTGAGTGGGAATGATAGTTCTTATTGTAGTTGGGGTTTTTTCCCTTTAGGGTTTTCTGGGAATTCGAAGGATGTGAATGGTGTTGCCGCCAATTGGAACCCCTTTTCGCCTTTGTTTTCTTGTCCTTTGAAGGGGTCCTCCTATAGGAAGCCTCAGAGGAATTGGGCTTACTACGATGAAGACGCTGCGGCCGCATATATCGAGTTGTCCGACCCGAGTGATGATGATTCCAGTGACGGGGACTGGAGGGGTGGCAAGAGGAGTGGAAAGAAGAGGACTAGAGGGAAGAAAAATTCTGGTAATGCTAGGAGGGAGCCTGTGGAGAGACCTAGGAGGGGTGTTGATGTAGGAAATGAGAATGTGGGTTCTGGTGCTAGTGCTAATGCTAATGCTGCCAATGCTGTGCCAGCTGGTGCGAGGGGGGATTCTAGTAGGAGGGCTACGTTGGGTGGTTCGAGGAGGAGGGGTGCCGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGACTTCCCGTGGAGCGTGCAGCATAGAAGGGAACGCTGCCGGACATGCTGAAGACAACATTGAAGGGATTGGGTTTTTCGAAGGCCTTGATGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGGTTAAGGGTCATTAA 1380 0.558 MDGSGGIREEAERWLYTANKLLSARDLHGARSFAIRARETDPTYEVSQHLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNMDHIAAQYRRLALLLDPLRNIFAFAGHAFSLVNDAWSVLSNSAKKAMYDSDLRLLTTPAPPPPQPRQPQPQPTPRRNPKSRDDLSESTRPNRPDPAESTRTTETDTGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGNDSSYCSWGFFPLGFSGNSKDVNGVAANWNPFSPLFSCPLKGSSYRKPQRNWAYYDEDAAAAYIELSDPSDDDSSDGDWRGGKRSGKKRTRGKKNSGNARREPVERPRRGVDVGNENVGSGASANANAANAVPAGARGDSSRRATLGGSRRRGAGNLGKLDLNVEFSNEVEETSRGACSIEGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2061 459 CDD DnaJ 70 124 IPR001623 -
Aed10g2061 459 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 459 - -
Aed10g2061 459 SUPERFAMILY Chaperone J-domain 66 135 IPR036869 -
Aed10g2061 459 MobiDBLite consensus disorder prediction 136 189 - -
Aed10g2061 459 MobiDBLite consensus disorder prediction 304 391 - -
Aed10g2061 459 MobiDBLite consensus disorder prediction 333 349 - -
Aed10g2061 459 MobiDBLite consensus disorder prediction 174 189 - -
Aed10g2061 459 Pfam DnaJ domain 70 132 IPR001623 -
Aed10g2061 459 Gene3D DnaJ domain 58 140 IPR036869 -
Aed10g2061 459 SMART dnaj_3 69 127 IPR001623 -
Aed10g2061 459 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Aed10g2061 459 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 459 - -
Aed10g2061 459 MobiDBLite consensus disorder prediction 159 173 - -
Aed10g2061 459 MobiDBLite consensus disorder prediction 139 158 - -
Aed10g2061 459 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2061 Aed-Chr10 24448087 24449466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2061 10 458 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 45.085 1.81e-108 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2061 - - gmx:100811866 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2061 10 24448087 24449466 Aed4g1997 4 23490385 23491854 PCT