Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2060 ATGGACGGTGGCAGCGGCGGGAACAGACCGGAGGCGGAGCGGTGGCTCTACACTGCGAACAAGCTGCTGAGCTCGCGTGACCTCCACGGCGCGCGTTCCTTCGCGATCCGCGCGCGCGAGTCGGACCCGACCTACGAGGCCTCGGAGCACCTCCTGACGGTGATCGACACGCTCCTCGCAGGCGAGTCGCGGATCAACGATCACCACAGGGATTGGTACGGTATTCTCCAAATCCTGCGTTACACAACAAACATGGACCACATTGCCGCACAGTATCACCGCCTCGCACTCCTCCTCCACCCTCAGCGTAACATGTTCGCCTTCGCCAGCCACGCCTTTTCTCTTGTCAACGACGCCTGGTCCGTACTCTCCAATCCCGCCAAGAAAGCCATGTACGACAGCGAGCTCCGCTTTCTCACCACGCCGCAGCCACCGCCGCCGCAACATCCGCAGCCCCAGCCTCAACCCACGCCCAGGAAAAACCCTAAATCGAGAGACGATTCGTCCCAGTCAACTCGGACGGATCATCCTGGGCCTGCCGAGTCGACTCGGACCGTGGAAACTAATACGGGAACTGGAACGGGAACGGGAACGAGTTTCTGGACCTCGTGCCCTTACTGTTATGTCCTGTACGAATATCCGAAGGTGTATGAGGAGTGTACCTTGAGGTGTCAGAGTTGTCGGAGAGGGTTTCATGCGGTGGTGATACGGTCGCCGCCGCCGTTGAGTGGGAAAGATGGTTCTTATTGTACTTGGGGGTTTTTCCCGTTAGGGTTTTCTGGGAATTCGAAGGATGTGAATGGTGTTGCCGCCAATTGGAACCCCTTTTTGCCTTTGTTTCCTTGCCCCTTGAAGGGCTCCTCCTATAGGAAGCCTCAGAGGAATTGGGCTTACTATGATGACGAGGTTGCGGCAGCGTATATCGAGTTATCTGACCCGAGTGGCGATGATTCCAGTGACCGGGACTGGAGGGGTGGCAAGAAGAGTGGAAAGAAGAGGACTAGAGGGAAAAAAGATTCCGGTGATGGTAGGAGGGAGCCTGTGGAGAGACCTAGAAGGGGTGGTCATGTAGGAAATGAGAGTGTGGGTTCTGGTACTGCTGCTGGTGGCGGTGCTGGTGCCAATGCTGTCAATGCTGTACCATCTGGTGAGAGGGGGGAGTCCAGTAAGAAGACTGCGTTGGGTGGTTCGAGGAGGAGGGGTGCCGGAAACTTGGGAAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGCGGAGGAGCCTTCCCGTGGAGTGCGCAGTCCTGAAAGGAATGCTGCTGGACATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAAGGCCTTGATGAGTTCCTCAGTAGCTTGCCTATTCTCAATGTTGAGGCAGATGATAAGGTTAAGGAATAA 1410 0.5574 MDGGSGGNRPEAERWLYTANKLLSSRDLHGARSFAIRARESDPTYEASEHLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNMDHIAAQYHRLALLLHPQRNMFAFASHAFSLVNDAWSVLSNPAKKAMYDSELRFLTTPQPPPPQHPQPQPQPTPRKNPKSRDDSSQSTRTDHPGPAESTRTVETNTGTGTGTGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGKDGSYCTWGFFPLGFSGNSKDVNGVAANWNPFLPLFPCPLKGSSYRKPQRNWAYYDDEVAAAYIELSDPSGDDSSDRDWRGGKKSGKKRTRGKKDSGDGRREPVERPRRGGHVGNESVGSGTAAGGGAGANAVNAVPSGERGESSKKTALGGSRRRGAGNLGKLDLNVEFSNEAEEPSRGVRSPERNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVEADDKVKE 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2060 469 MobiDBLite consensus disorder prediction 413 436 - -
Aed10g2060 469 SUPERFAMILY Chaperone J-domain 67 137 IPR036869 -
Aed10g2060 469 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Aed10g2060 469 MobiDBLite consensus disorder prediction 140 159 - -
Aed10g2060 469 Gene3D DnaJ domain 60 143 IPR036869 -
Aed10g2060 469 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 5 468 - -
Aed10g2060 469 MobiDBLite consensus disorder prediction 311 436 - -
Aed10g2060 469 SMART dnaj_3 70 128 IPR001623 -
Aed10g2060 469 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Aed10g2060 469 MobiDBLite consensus disorder prediction 335 356 - -
Aed10g2060 469 CDD DnaJ 71 125 IPR001623 -
Aed10g2060 469 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 468 - -
Aed10g2060 469 MobiDBLite consensus disorder prediction 138 194 - -
Aed10g2060 469 MobiDBLite consensus disorder prediction 173 194 - -
Aed10g2060 469 Pfam DnaJ domain 71 133 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2060 Aed-Chr10 24444094 24445503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2060 11 468 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 43.129 2.63e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2060 - - gmx:100811866 711.064