Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2041 ATGAGACGCGTTTCTCGCAGTGGTAGCACCAATAAGGTGGGTGTGACGCGTCAGCGGTTGGAGGCGGTGTCGTGGAGGGGCGACGATGGAGGGAGAGTGGCGTCGTACGTGGCGGTGGTTGAGGGAGGAGGGGAGGCCACGGAGGAGAGGAGAGGAGATTCAAACCTGATTGGTTTCGTTTTATCATCCTTAATCTCCTCAAACACGGTTCAGAGCACATCGATAGATACGAGGATGTTGCGGATTTCGATTGAACGAGTGAGGAAGATGAACTTTCTCAGGCCTCAGGTCCGTGCTATCCGAGCGCCCTCGCCCCATTTGTCAACTTCTGCTCAACCATCATCTTCCAGTAAGGGCAATCCACCGGTAAGCTCAAGTTTGGAGTACTTGCTTTCATGGAGGGTTCCAAATCTTATTGGGGGAAATTTTGTTGACTCAAAATCATCAACTGTCATTGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCTACGGATGAAGAGTTTAAGGCAGCTGTATCTGCAGCAAAGAAGGCATTTCCATCATGGCGCAACACTCCGATTACAACGCGCCAACGTGTTATGTTGAAACTTCAAGAGCTTATACGCAGAGATATGGATAAACTTGCTCTGAATGTGACCACTGAACAAGGAAAGACATTGAAGGATGCACAAGGAGATGTATTTCGTGGTCTAGAGGTGGTGGAACATGCTTGTGGGATGGGAACTCTGCAAATGGGGGAGTATGTTTCTAATGTATCAAATGGAATCGATACTTACAGCATTCGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTGTGGCTGTTACCTGTGGTAATACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCTGATGGTGTCTTAAATATAGTTCATGGAACCCATGTATGCCATCACCTGGATATTGTGAACGCTATTTGTGATGATGACAACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCATCAGCTAAAGGGAAACGTGTTCAGTCTAACATGGGAGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTCTTAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGTATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGCTCAAAAGCATGGGAAGAAAAACTTGTAGAGCGTGCCGAAGCTCTTAATGTTAATACCGGAACTGAACCTGATACAGATCTTGGTCCGGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAGATTAGTTCAGTCTGGGGTTGAAAGTGGTGCCAAACTACTGCTTGATGGAAGAGATATAGTGGTCCCGGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATATCAATGCCAACATGGAGTGCTACAAGGCTGATAGCTTGGAAGAGGCCATAAACATCATCAACAGTAACAAGTATTTGTCAACAACTTTTTGTTGTCACTGCCTTCTGTTAAACTGCTATATTCTTACTCTTGACTTTTCCAACAGTCTTACTCTTATGATAATGTTGTCACTGCACTTGAAACAGGTTGGCATCAATGTCCCCATTCCAGTTCCTTTGCCCTTCTTCTCGTTCACCGGCAACAAGGCATCATTTGCTGGTGATCTAAACTTCTATGGCAAGGCAGGGGTTAACTTCTATACACAGATAAAGACAATAACACAGCAATGGAAGGATTCAACTGGTGGCGGAAGCAAGATTAACATGGCAATGCCAACCTCTCAAAAATAA 1908 0.4471 MRRVSRSGSTNKVGVTRQRLEAVSWRGDDGGRVASYVAVVEGGGEATEERRGDSNLIGFVLSSLISSNTVQSTSIDTRMLRISIERVRKMNFLRPQVRAIRAPSPHLSTSAQPSSSSKGNPPVSSSLEYLLSWRVPNLIGGNFVDSKSSTVIDVINPATQEVVSQVPLSTDEEFKAAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMGTLQMGEYVSNVSNGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPDGVLNIVHGTHVCHHLDIVNAICDDDNIKAISFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQRCMALSTVVFVGGSKAWEEKLVERAEALNVNTGTEPDTDLGPVISKQAKERIHRLVQSGVESGAKLLLDGRDIVVPGYESGNFIGPTILSDINANMECYKADSLEEAINIINSNKYLSTTFCCHCLLLNCYILTLDFSNSLTLMIMLSLHLKQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGGSKINMAMPTSQK 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2041 635 MobiDBLite consensus disorder prediction 103 122 - -
Aed10g2041 635 SUPERFAMILY ALDH-like 129 617 IPR016161 GO:0016491
Aed10g2041 635 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 137 616 IPR010061 GO:0004491
Aed10g2041 635 CDD ALDH_F6_MMSDH 135 616 IPR010061 GO:0004491
Aed10g2041 635 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 139 593 IPR016162 GO:0016491
Aed10g2041 635 Pfam Aldehyde dehydrogenase family 143 612 IPR015590 GO:0016491
Aed10g2041 635 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 118 631 IPR010061 GO:0004491
Aed10g2041 635 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 118 631 - -
Aed10g2041 635 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 410 421 IPR016160 GO:0016491
Aed10g2041 635 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 385 585 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2041 Aed-Chr10 24321366 24328308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2041 79 600 Aldehyde Dehydrogenase Gene Family AT2G14170 71.348 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2041 K00140 - gmx:100811544 881.708