Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2038 ATGTATGCCCTCCAGTTATCCAATCTTAATTTCTCAGTGATGTTGTCAACCATTTTCTTTCTCTTGATCATTGCCACATATGCTTCTCCTTTATCCTTTAACTTTGGTAGTTTCGAACCTAATGACCAGACAATACTATATAACAGATCATACGCTGCAGCATCAAATATCCAACTCACAAGTAACCTAAGGGACACGAACATGAATGACAGCTTTGGTCGAGCCACATATTACCAACCCATGCACCTGTGGGACAAAGCCACTGGAATTCTCACAGATTTCACAACCCATTTCACTTTTGTCATAAATTCACAGACCAAAAGTGACTATGGAGATGGGATTGCATTCTTCCTTGCCCCTGCTGATTCAGGGATTCCTAATGCTACATTAGGAGGTACTATGGGTCTCACACTTGATAACCAAACTTTGAACTCCACTGACTATCCATTTATTGCTGTGGAGTTTGATATCTTTGGGAATACTGGCTGGGATCCACTTCCACCCCATGAGCATGTTGGAATTGACATCAATTCATTGAAATCCGTCGCTAATGTCACATGGTGGCCTGATATCAAGGAAGGGAAACTCAACAACGCTTCGATCAGTTACAATTCCAGTTCATTCAATTTAAGCGTTGCGTTCAATGATTTTAGAAATGGCACCACTCTGCCACAACATCTATCTGCCATAGTTGATCTGAAGCTTCATTTACCAGAATTTGTTACTTTTGGCTTCTCAGCTGCCACTGGAAAAAGCTTTGCTATTCACACCATCAATTCATGGGAGTTTAGCTCAACTTTGGGAGCAAGTCAGAAGACAAAGGACAACACAGGCTTGGCAGTGGGATTGGGCATCGGCGGATTTGTTTTGATTGGTGGGTTGGGTTTGATTTCAATTGTCTTGTGGAAGAAGTTGAAGAAAAGAAGGGATTTTGAGGAGGAGCAGATCAAATGTTTGATGATTGTTGGTCTTTGTTGTGCTCACCCTGACCATAGTAATAGGCCTTCAATTAAACAAGCAATTCAAGTTCTTAACTTTGAAGCTCCCTTGCCTAATCTTCCATCAAGTTATCCTGTTCCAACATATGTTGAGCGTCCACTTCACTCATTCAGCTTAAATGCCTCAGAGGAAGGTCAAAGCCAGATCACAAGCTCCAGTGCAAACACAAACTCTTCCTTGTTCACCACAATTTCTGATGATGCTTCTCCCTCTGTGTCCCTTCTGTACTCACGCTACCCCAACCAAGCCATATCTGATTATTCCACTTCCACCACAACCAACACCAATTCTCCTTTGATGGCAGCATCTAGCTACTGTAAGAAAAGTTATGTACATGCTTCTTTTTTGCATGTAACATTAACAACACTCTTGCTTCTTGCAATACCTCGTGCTGCTTCATTATCATTCAACTATCAGCAACTTGGTGTCGCGGTAAACGACCTCAACCGTTCAGGAAAAGCAGAACCTGAAAATAATGTCATCCAACTCACCACGTTTGAGCCAGATAGTTATGGCAGAGTTATATATAACAAGCAGTTGCATCTCTGGGACAAGAACTCAGGAAAAGTCACAGACTTCACCACCCATTTCTACTTTACCATCGACACCCCAAATAAAACCCACCATGGAGATGGCATCACGTTCTTTCTGGCACACCCAGAGTTTCCTCAATCTGACATAGATGGAAGTGGAATTGGTCTTGCAAGCCGTGAACAACTGAAGAACATAGATTATGCAAAAGATTATCCTTTTGTAGCAGTGGAATTTGATACCTTTGTTAATGACTGGGATCCGAAATATGACCATGTGGGTGTCGATGTTAATTATATTAACACTACTGATACTACAGAATGGTTCCCTAGCATGGATCAGAGAGGCTATGATGCTGATATTAGTTATGATTCTGCTTCAAACAGATTAACTGTTTCATTCACTGGATATAAGGATGATGTCAAAATTCAACAGCACTTGTTAGCTGTGGTCAATTTGAGTGATGTCTTACCTGAATGGGTTCAGTTTGGCTTCTCTTCAGCAACAGGTTATTTTTATGAGAGACATACTCTTAGCTCTTGGTCCTTCAACTCTACTTTGGACATGGAACTGCAAAAGGGTGGAAGCAAGACAGGGCTGGTGATAGGGCTGAGTGTTGGACTTGGTGCAGTCAAGATCATTAGTCAACTGAGGCATAAACATTTGGTTCAACTCTTTGGGTGGTGCCATCAGCAAAGTGACCTCCTGCTGGTTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTGTTCAAAGGAAAAGGCCTTCTGACATGGAAAGTGAGATATGATATTGCTAAAGGCCTGGCCTCAGCACTATTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTTATGTTGGATTCTAGTTTTAACACAAAGCTTGGAGATTTCGGCTCGATGCACTCTAGGACTACTGCTTTTGCAAATAACAAACACGTGTCTTCAAATTCAAGCAGTAGCTTATTCACTGGATCCTCACAGTCGAGCACGTCTGTTTTTACAAACAAATTCGACCACCAAATTGGTTATATTAACTAG 2601 0.4148 MYALQLSNLNFSVMLSTIFFLLIIATYASPLSFNFGSFEPNDQTILYNRSYAAASNIQLTSNLRDTNMNDSFGRATYYQPMHLWDKATGILTDFTTHFTFVINSQTKSDYGDGIAFFLAPADSGIPNATLGGTMGLTLDNQTLNSTDYPFIAVEFDIFGNTGWDPLPPHEHVGIDINSLKSVANVTWWPDIKEGKLNNASISYNSSSFNLSVAFNDFRNGTTLPQHLSAIVDLKLHLPEFVTFGFSAATGKSFAIHTINSWEFSSTLGASQKTKDNTGLAVGLGIGGFVLIGGLGLISIVLWKKLKKRRDFEEEQIKCLMIVGLCCAHPDHSNRPSIKQAIQVLNFEAPLPNLPSSYPVPTYVERPLHSFSLNASEEGQSQITSSSANTNSSLFTTISDDASPSVSLLYSRYPNQAISDYSTSTTTNTNSPLMAASSYCKKSYVHASFLHVTLTTLLLLAIPRAASLSFNYQQLGVAVNDLNRSGKAEPENNVIQLTTFEPDSYGRVIYNKQLHLWDKNSGKVTDFTTHFYFTIDTPNKTHHGDGITFFLAHPEFPQSDIDGSGIGLASREQLKNIDYAKDYPFVAVEFDTFVNDWDPKYDHVGVDVNYINTTDTTEWFPSMDQRGYDADISYDSASNRLTVSFTGYKDDVKIQQHLLAVVNLSDVLPEWVQFGFSSATGYFYERHTLSSWSFNSTLDMELQKGGSKTGLVIGLSVGLGAVKIISQLRHKHLVQLFGWCHQQSDLLLVYEFMENGSLDSYLFKGKGLLTWKVRYDIAKGLASALLYLHEEWEECVLHRDIKSSNVMLDSSFNTKLGDFGSMHSRTTAFANNKHVSSNSSSSLFTGSSQSSTSVFTNKFDHQIGYIN 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2038 866 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
Aed10g2038 866 PANTHER - 17 313 - -
Aed10g2038 866 Pfam Protein kinase domain 721 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2038 866 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 268 IPR013320 -
Aed10g2038 866 Pfam Legume lectin domain 466 698 IPR001220 GO:0030246
Aed10g2038 866 Pfam Legume lectin domain 31 275 IPR001220 GO:0030246
Aed10g2038 866 ProSitePatterns Legume lectins beta-chain signature. 585 591 IPR019825 -
Aed10g2038 866 Gene3D Transferase(Phosphotransferase) domain 1 718 849 - -
Aed10g2038 866 SUPERFAMILY Protein kinase-like (PK-like) 721 826 IPR011009 -
Aed10g2038 866 PANTHER RECEPTOR LECTIN KINASE 451 705 - -
Aed10g2038 866 PANTHER RECEPTOR LECTIN KINASE 309 409 - -
Aed10g2038 866 PANTHER RECEPTOR LECTIN KINASE 721 819 - -
Aed10g2038 866 ProSitePatterns Legume lectins alpha-chain signature. 667 676 IPR000985 -
Aed10g2038 866 Gene3D - 465 708 - -
Aed10g2038 866 Gene3D - 29 281 - -
Aed10g2038 866 SUPERFAMILY Concanavalin A-like lectins/glucanases 465 697 IPR013320 -
Aed10g2038 866 PANTHER - 721 819 - -
Aed10g2038 866 PANTHER - 309 409 - -
Aed10g2038 866 ProSiteProfiles Protein kinase domain profile. 682 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2038 866 PANTHER - 451 705 - -
Aed10g2038 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Aed10g2038 866 CDD lectin_legume_LecRK_Arcelin_ConA 467 697 IPR001220 GO:0030246
Aed10g2038 866 SMART serkin_6 710 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2038 866 PANTHER RECEPTOR LECTIN KINASE 17 313 - -
Aed10g2038 866 CDD lectin_legume_LecRK_Arcelin_ConA 31 267 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2038 Aed-Chr10 24305544 24311359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2038 695 819 Receptor kinase-like Gene Family AT5G10530 60.465 5.08e-41 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed10g2038 Lectin_legB 5.8e-65 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2038 - - gmx:100817213 487.263