Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2035 ATGGCAGGTTGTGATTGCCTTTTTGGTCTTGAATTTGATGTAATCTTTCTTGGGTTTTGTTATGCAAGAGTAGCCTTTTTGTTCCTCTTGATCATACTCATCATCCCTCTTGCAAAAGCACATCCTCAACCCGTTTCTTTTGATTCACCTTCTCTAATAATGCTGCTCACGCTGCAAAACATCTACATCTGCAAGGAAATTTCTGGCATCCACCTTGCAGTGGACTCAAATGACAATGGCGATGGTGGTAGCGTTGGCCGTGTCACAATTCCACAAGCTATTCATCTTTGGAACAAGACCTCAAACGAACTCAAAAGCTTCACTACTCACTTTTCCTTTAAAATTTCCTCAAACTCGTGGGTTTCTCCTCTTTGTGGAGACGGTTTGGCATTCTTCCTAATAAACCGGAATCTTGTGAATGTGGTGAATGATGAACTGAAGCGTGGAGGCCTTGGCATTGGAAGTGTGAACGTAAGCAACCCTCTTCCAACTGAGTATCAATTTGTGGCAGTGGAGTTTGACACTTTCTCAAACCAGTGGGACCCTGCAGAGACACATGTTGGTGTGAATGTCAACTCTATGCAATCTGAAATAGTTGAGGAATGGAACACAGATGTTTCTTCTTCAGGTGGCTCTTATGAGTGCAGTATTGAGTACAGCTCCGGAGATTGGCGTCTAAACGTTTCTTTCAGCAGATTGGATCTCGACAGAGAACGAGTTATGCGGCACCTTCCTTACCACATTGATTTGAGAGACTACTTGCATGAGTGGGTTGTTGTTGGCATATCAGCTGCAACAGGAGATGGATACGAGGAACACATCTTGATGTCATGGTCTTTTAATAAAACAACAAGTGATGATGCAGATCAAACGAAGGAAAAGATGTTGGACAAGAAAATGTTGTTGGAGGGAATAGGAATTGGTTTAGGTGGGTGTATGTGTGTGAGTTTGTGTGTGTTGGCTATCTTTTTGTTGAGGAAGAGGGATAAAGGAAAAGAGAAAGAAGTCACTTCAGAAACCGCTTCTGATTTGAGGAGGGATGATGAGTTTCAAATGGGAATTGGACCTAAGAAGATCAGCTATGAGGAGTTGGTGTCTGCAACAAACAACTTTGAAGAGACACAGAAGCTGGGGAAAGATGGTTTTGGTTGTGTTTACAAAGGCTATTTCAAAGACTCAGACTCCTATGCTGCTATAAAGAGGATATCATCAGGTTCAACATATGCATCCGAAGTGATGATCATTAGCCAGTTGAGGCACAGGAATTTGGTGAAACTCATGGGTTGGTGCCACAAGAAGAATCATCTCTTTCTGATATATGAGTACATGCCAAATGGAAGCTTGTGTTCTCATCTTTTTTGCGGAGTAAAAAGTATCTTGCCATGGCATGTGAGGTACAAGATAGCTCTTGGCTTGGCCTCAGCATTGTTTTACCTACAAGAAGAGTGGGAGAAGTGTGCGCTTCATAGGGACATCAAATCAAGTAACATAATGTTGGATTCCAATTTCAATGCCAAGCTTGGGGATTTTGGCCTTGCTAGGCTAGTGGATCATGAGAAAGGGTCACATTTGCATACCACATACCACTTTGCCCCTGAATACAATAGCACAGGCAAGGCTAGAAAGGAATCTGACATGTTCAGTTTTGGGGTTGTTTTGTTGGAGGTGGCCAGTGGAAAAAAAAACATTTTTCACCACAAAGAGAAAAAGGGTCAAGTTTCATTACTTGAGTGGGTGTGGGAGCTCTATAGACTTAGAAATCTCCTTGCAGCAGCAGATCCAAAGCTACATGGGGAATTTGATGTGAAGCAAATGGAATGCTTGCTTGTTGTTGGTCTTTGGTGTGCTAATCCTGATAGCAGAAGCAGACCCTCTATAAAGGAAGTGATTAAAGTGCTTAACTTCGAAGCTCCTTTTCCAATTCCCCCACACAAATCCCTGTGA 1944 0.4254 MAGCDCLFGLEFDVIFLGFCYARVAFLFLLIILIIPLAKAHPQPVSFDSPSLIMLLTLQNIYICKEISGIHLAVDSNDNGDGGSVGRVTIPQAIHLWNKTSNELKSFTTHFSFKISSNSWVSPLCGDGLAFFLINRNLVNVVNDELKRGGLGIGSVNVSNPLPTEYQFVAVEFDTFSNQWDPAETHVGVNVNSMQSEIVEEWNTDVSSSGGSYECSIEYSSGDWRLNVSFSRLDLDRERVMRHLPYHIDLRDYLHEWVVVGISAATGDGYEEHILMSWSFNKTTSDDADQTKEKMLDKKMLLEGIGIGLGGCMCVSLCVLAIFLLRKRDKGKEKEVTSETASDLRRDDEFQMGIGPKKISYEELVSATNNFEETQKLGKDGFGCVYKGYFKDSDSYAAIKRISSGSTYASEVMIISQLRHRNLVKLMGWCHKKNHLFLIYEYMPNGSLCSHLFCGVKSILPWHVRYKIALGLASALFYLQEEWEKCALHRDIKSSNIMLDSNFNAKLGDFGLARLVDHEKGSHLHTTYHFAPEYNSTGKARKESDMFSFGVVLLEVASGKKNIFHHKEKKGQVSLLEWVWELYRLRNLLAAADPKLHGEFDVKQMECLLVVGLWCANPDSRSRPSIKEVIKVLNFEAPFPIPPHKSL 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2035 647 CDD lectin_legume_LecRK_Arcelin_ConA 77 281 IPR001220 GO:0030246
Aed10g2035 647 PANTHER - 70 644 - -
Aed10g2035 647 Gene3D Phosphorylase Kinase; domain 1 356 442 - -
Aed10g2035 647 SUPERFAMILY Protein kinase-like (PK-like) 355 634 IPR011009 -
Aed10g2035 647 SMART serkin_6 371 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2035 647 ProSiteProfiles Protein kinase domain profile. 371 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2035 647 ProSitePatterns Legume lectins beta-chain signature. 169 175 IPR019825 -
Aed10g2035 647 Pfam Legume lectin domain 82 292 IPR001220 GO:0030246
Aed10g2035 647 Gene3D Transferase(Phosphotransferase) domain 1 443 640 - -
Aed10g2035 647 Gene3D - 49 299 - -
Aed10g2035 647 Pfam Protein kinase domain 371 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2035 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 82 285 IPR013320 -
Aed10g2035 647 PANTHER LECTIN RECEPTOR KINASE 70 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2035 Aed-Chr10 24284438 24286395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2035 85 645 Receptor kinase-like Gene Family AT5G10530 44.444 2.07e-146 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed10g2035 Pkinase 5.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2035 - - cam:101492002 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2035 10 24284438 24286395 Aed10g2035 10 24284438 24286395 ECH
Aed4g1983 4 23403290 23405323 Aed10g2035 10 24284438 24286395 PCT