Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2034 ATGGCTAGTTGTGGATGGCATATTGGTTTTCTGCTCAGGAGAACCATTTTGTTAATCTTAGTAGTCCCCATTGCAAATGCTCAACCTCAGTCTTTGTCTTTTGATTACCCCACCTTCAATTCAACTCAAGTAAAGCAACTAAAGCTAGAAGGTAATGCTTCTACCTCAGGTTCTGCTATCCAACTCACAAGGAACACAATAGATCCAATCAATAACGGGTCCGGGACAGTAGGAAGAGTTACATATCCAGAGCAAATAGATCTTTGGAACAACAATTCAAATGAACCAAAAGACTTCACTACCAACTTTTCCTTTGTTGTTTCCTCAAATGATCAGAGTCATTATGGAGATGGCTTGGCATTCTTCCTAGCAAGCCCAAATCTGCCACCAACTAAGGATACAGAACAACTAAGAGGGGGAAGCCTTGGCCTTGGCCTTGTGGATGGTGATCAAAATCTTCTCGAGATAGATTATCAATTTGTGGCGGTGGAGTTTGACACCTTCAAAAACAAATGGGACCCAGATGGCACACATGTAGGTATAAACATCAATGATATGAAGTCTAAAATACTTGAGAAATGGTGGACAAATATCACACAAGGGGAAGTTTGTAACTGTAGTGTTGTATATAGTTCTAGAAACAATGTCTTGGAAGTTTCTTTCACTGGATACAAACTAGGTGGTGGGAATGTAACACAGGTTATTCTGCAGCACCTTTCGTACCATGTTAATATCATAGATCAATTACTAAAGTCGGTTATTGTTGGCATATCAGCTACAACAGGAGATTATTCTGAGGAACATACCCTGCTGTCATGGTCATTTAGTACAACTACAATCCCACCAAGTAAGGTCGATCCTTCAAAGGGAAGCAAATTAGTGATCCACACAATATTGTTGGTGGGAATTGGAATTGTTACAGGTGGCTTGGTTTGCTGTGAAGTTAGTAGCAATTGTGGTGACAACCTAGTTGGGATCATAGTTGCTCTAACTAGCATCTGCTTACCTTTTTGCTTAAAAAAAGAAGAAGCCACTTCTCATCTTGAGATGGATGACGAATTCCAAACAAGCACTACACTTAAGGAGATTAGTTATTATGAATTGGCAACTGCAACCAACAACTTTGAAGAGACAAAGAAGCTTGGCCAAAGTGGTTTCGGTTGTGTTTATAAAGGCTATTTGAAAGACTTGGATTCCTATGCTGTTATAAAGAGGATATCATCAGGTTCAACACAGGGTTTGAAGGAATATGCAGCAGAAGTGACAATTATTAGCCAACTCAAGCACAGGAATTTGGTGAAACTCACCGGTTGGTGCCACAAGAAGAACGATCTCTTCCTGATATACGAGTACATGTTGAATGGCAGCTTAGATTCTTGTCTTTTTGGTGGAAAAAAGTTCTTGTTATGGCAGGTGAGGTACAATAATGTTGCTCTTGACCTGACATCGGCATTGCTTTACCTTCAGGAAGAATGGGAAAAATGTGTGCTTCATAGGGACATCAAATCAAGCAACATAATGTTGGACTCCAATTTCAATGCCAAGCTTGGAGATTTTGGCCTGGCTAGGCAAGTGGATCATGAGAAAGCGTCACAAGTTTCTGAATGCATGAATCCAGGCAAGGCTCAAAAGGAATCCAACATATTCAGTTTTGGGGTTGTTTTGTTGGAGGTAGCCACTGGAAGAAAAGCCTATCACCACAAAGACATGGAGGGTAAAGTATCATTAATTGAGTGGGTGTGGGAGCATTATGGACTGAGAAATCTCCTTGGAGCAGAAGATCCAAACCTATGTGGGGAATTTGATGTGCAGCAAATGGAATGCTTACCGGCTGTTGGTCTTTGGTGTGCAAATCCAGATTGCTCATCCAGACCCCCTATAAGGAAAGTGATTAAGTTCGAAGCTTCATTATCAATTCTCCCACAACAGATCCCGTTCAAGTCTATCTTTGTCCAATAA 1959 0.4079 MASCGWHIGFLLRRTILLILVVPIANAQPQSLSFDYPTFNSTQVKQLKLEGNASTSGSAIQLTRNTIDPINNGSGTVGRVTYPEQIDLWNNNSNEPKDFTTNFSFVVSSNDQSHYGDGLAFFLASPNLPPTKDTEQLRGGSLGLGLVDGDQNLLEIDYQFVAVEFDTFKNKWDPDGTHVGININDMKSKILEKWWTNITQGEVCNCSVVYSSRNNVLEVSFTGYKLGGGNVTQVILQHLSYHVNIIDQLLKSVIVGISATTGDYSEEHTLLSWSFSTTTIPPSKVDPSKGSKLVIHTILLVGIGIVTGGLVCCEVSSNCGDNLVGIIVALTSICLPFCLKKEEATSHLEMDDEFQTSTTLKEISYYELATATNNFEETKKLGQSGFGCVYKGYLKDLDSYAVIKRISSGSTQGLKEYAAEVTIISQLKHRNLVKLTGWCHKKNDLFLIYEYMLNGSLDSCLFGGKKFLLWQVRYNNVALDLTSALLYLQEEWEKCVLHRDIKSSNIMLDSNFNAKLGDFGLARQVDHEKASQVSECMNPGKAQKESNIFSFGVVLLEVATGRKAYHHKDMEGKVSLIEWVWEHYGLRNLLGAEDPNLCGEFDVQQMECLPAVGLWCANPDCSSRPPIRKVIKFEASLSILPQQIPFKSIFVQ 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2034 652 Pfam Legume lectin domain 31 285 IPR001220 GO:0030246
Aed10g2034 652 Gene3D Phosphorylase Kinase; domain 1 359 451 - -
Aed10g2034 652 SMART serkin_6 375 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2034 652 SUPERFAMILY Protein kinase-like (PK-like) 350 632 IPR011009 -
Aed10g2034 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 283 IPR013320 -
Aed10g2034 652 PANTHER - 15 646 - -
Aed10g2034 652 CDD lectin_legume_LecRK_Arcelin_ConA 32 278 IPR001220 GO:0030246
Aed10g2034 652 PANTHER LECTIN RECEPTOR KINASE 15 646 - -
Aed10g2034 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Aed10g2034 652 ProSiteProfiles Protein kinase domain profile. 375 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2034 652 Gene3D - 30 298 - -
Aed10g2034 652 ProSitePatterns Legume lectins beta-chain signature. 161 167 IPR019825 -
Aed10g2034 652 Pfam Protein kinase domain 375 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2034 652 Gene3D Transferase(Phosphotransferase) domain 1 452 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2034 Aed-Chr10 24278415 24280561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2034 18 645 Receptor kinase-like Gene Family AT5G10530 39.878 2.72e-133 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed10g2034 Pkinase 1.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2034 - - cam:101492002 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2034 10 24278415 24280561 Aed10g2034 10 24278415 24280561 ECH