Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2027 ATGGAGAACTACCAGTACCCGGCGTCGTACCCGGACTCCGGCGAGTCATCGCCGCGCTCGAGGGAGATCGACTTCGAGAACCCGCCGCCGTGGGACGAGCAGCAGAGCCAGAACTACAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCGCGAACCCACGACAACCAGCTCTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTCGACCGCTCCGTCAAGTTCCCGGCGTTTCTCTCCAAGCTCGCTGCTCTCTGCGACGCCGCGCCGCAGGACCTCACCTTCAAGTACCAGCTCCCCGGCGAGGACCTCGACGCCCTCATCTCCGTCACCAACGACGATGACCTCGAACACATGATGCACGAGTACGACAGACTCTATCGCCCTAACACTAAACCCGTCAGAATGAGACTCTTTCTCTTCACTCTTTCGAACTCAAACACAACAACAAACCCTAATCCCTCTTTCTCCTCCGAACGCGACCGTTTCGTCGAGGCTCTTAACTCGGGTCCGATTCCGACTCAACCCGACCCGGTCAAAACTCCACCTGTCACTCCTTCCAATGTTGACTATCTATTTGGTTTGGACAAGGCCGTTGTTGCTCCTCCCACGCTTCCTCCTTCTTTCGTTGCTGCTGCTAAGTTCCAGGATCCCGTGCCAGAGCCTCTCGCGCCGACGCCGCCGGAGTATCAGTCTCGCGGCGGAGTTTCCGTTTCCGTTTCCGATAGAGTTGTCGGATCGGATCCGAATGTGAACTCCATCGAAATTCAGAGACAGTTGCAGCAGGAGATGCAGCGTTTGCAGTTTGCGGAGAACGAATACCGGAGGAGGAGTGAGGATGGATTCGCCGCTGGATATGCTGCCGCCGGAGGTGATTATTACATGCAGAAGATGCCGGAGAAGGTTCCGCCGCCGAATGCGCCGCCTCCGGCGGCGTACTGGTCGGATAAGCAGTTTACCGGCGATGGATATCAGACGACGGTGACGACGTCTCCCGGAGGCGGTGACCAGCCGATGTATGTCATCCAGGCGCCGGGGACGTTCTACCACGCGCCAGTGGTGCGGCCGCCGGCGGCGCAGGGGTACTACGCCGTGCAGAGGATGGGTTCTGAGGGGTACCGTGAGCAGGCGGTGTACGGCGGAGCGCCGCCGCAGCAGAAAACGGCGTATTCGTCGGCGGGGCAGGTTAAGGGACCCGTGTATTCGGATGGATATGGCGGCGTGGTGAGGCCGGAGAATGCGGGGTACGCGCAGGTGGCATATGATAGTGCGAGTGGGAGACAGGTATACTATACTACTGCGCAGGGAGGTGTGGTGCACGCGCCGCCGCAGCAGTACCAAGGTGTTCCGGCTCCGGATGTGAGGCCGGTGGGCCAGGATGTTAAGGTGGTTAACAAGGCCTCACAAGGTTCAGTGTGA 1428 0.598 MENYQYPASYPDSGESSPRSREIDFENPPPWDEQQSQNYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRSVKFPAFLSKLAALCDAAPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNTKPVRMRLFLFTLSNSNTTTNPNPSFSSERDRFVEALNSGPIPTQPDPVKTPPVTPSNVDYLFGLDKAVVAPPTLPPSFVAAAKFQDPVPEPLAPTPPEYQSRGGVSVSVSDRVVGSDPNVNSIEIQRQLQQEMQRLQFAENEYRRRSEDGFAAGYAAAGGDYYMQKMPEKVPPPNAPPPAAYWSDKQFTGDGYQTTVTTSPGGGDQPMYVIQAPGTFYHAPVVRPPAAQGYYAVQRMGSEGYREQAVYGGAPPQQKTAYSSAGQVKGPVYSDGYGGVVRPENAGYAQVAYDSASGRQVYYTTAQGGVVHAPPQQYQGVPAPDVRPVGQDVKVVNKASQGSV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2027 475 PANTHER OS05G0427100 PROTEIN-RELATED 1 469 - -
Aed10g2027 475 MobiDBLite consensus disorder prediction 1 35 - -
Aed10g2027 475 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 469 - -
Aed10g2027 475 SUPERFAMILY CAD & PB1 domains 56 153 - -
Aed10g2027 475 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Aed10g2027 475 MobiDBLite consensus disorder prediction 1 16 - -
Aed10g2027 475 CDD PB1_UP2 44 144 - -
Aed10g2027 475 Coils Coil 256 283 - -
Aed10g2027 475 Gene3D - 61 145 - -
Aed10g2027 475 SMART PB1_new 55 146 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2027 Aed-Chr10 24217839 24219266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2027 39 172 MAP Kinase Kinase Kinase AT5G57610 42.336 3.38e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2027 - - gmx:100810467 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2027 10 24217839 24219266 Aed4g1969 4 23327457 23328815 PCT