Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2022 ATGAGCACTACCACTATGTTGGAGTCTTTAGCTTGTTGCCAAAGCTTTAAGGGATATGACCTTACCAAGAAAAAGAGCCCGGGCTACTCTCATGCTATTTCACGAGTTTATAGAAATTCTATTTTCATGCTTTATTCAGTTAACAAGCAAGTGCCACTACTACCACACGGTGCTAGTCATGGGATATTTCATAGGACTTGCTTGTCAGAAAATTTCTTTAAAAGGTCTCCTCTCAATGTTTCATCATGGAAAGGATTGTATAGACCGCGATGGGAACGGCTACAAACAAATGTAGCATATGATGTTGCTGGTGCTGTTGATGTCATTAATGATTTAGGATTGGATACTCTTACTTTCCTGGCTGTGACCGTCTTAATTGTGCCTACATTCAAGTCACTTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGTGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAGTTTTATCCGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTGAAAGCTCTTGCAAAATATGCTTTTGTGATGGGATTGGCTCAGGTTGTATTGTCTACTTTAGCATTTACTGCTTTTGAACTTCCTCCTAATGGAGCTGTTGGAACAAAAATTTTGGAATTCCTTTTCCACTCTAGGCCTGATCTGGTGAACATCAGAAGTGTTGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTCCTACAGCTTCTTGCAGAGAGAGGTGAGCTTCCTACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTTTGCAGGACTTGGCCGTTGTCCCTCTTTTAGTCATACTTCCAATTCTAGAGAGCCAGAATATAACTGAGGGAAGTATATGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCACTAGGTGGATTGGGTCTGCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTACTCACACAGAAGTTGGGCTTTAGTGACACGCTCGGGGCATTTTTAGCTGGGGCAATTTTAGCTGAGACAAACTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTTGGGTTGTTTTTTCTGACTACAGGAACTTCAATTGACATGCAGCTCCTTTTGCGAGAGTGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGTTATAAAGACATTGATCATAACTGCAATTGGTCCTCGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTTGTTTTCTCTTTAGCAAATAGGCTTGGTGTGCTTCCTCTTGAGCTCAACAAGCTGCTCATAATTGTTGTTACTGCTTCCGAGACGGTTAACTTCAACGTTAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTGTCCAATCCATTAGCTTCAGGAGGAGATAGTAATGAAGTAGGATGGCCTTATGTGGCATTTGATCTTGATCCCTCAGTAGTAAAGGCAGCTAGAAAAACTGGCTTTCCTGTACTCTATGGGGACGGATCACGTTCAGATGTTCTTCACTCTGCTGGTGTCAATTCTCCAAAAGCTATCATGATTATGTACACTGGGAAGAAGAAGACAATTGAAGCTGTTCAGAGGCTAAGATTGAATTTTCCTGCAGTAATAATCTCTTTCCCACCCTTACTCTCACTGCAAGCCCCTTTATCTCAATTGGTTATCCCAATCTATACCAGAGCTCGTGATCTCAAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACGGATGCCATTTTGGAAAATGCAGAGACTAGCTTGCACCTGGGTTCTAAGCTGCTGAAAGGCCTTGGTGTGATGTCTGATGATGTAACATTTTTGAGTCAGCTTATTAGAGATTCCATGGAGCTCCAAGCCCAAGAAGCTAGCGACCAATCTGAAGATCGTGGATTGGATATTATGAAACCACTGCAGGTGAGAATTTCCGACGTGAGGGAAGCACGTGTACAAGCGGCAACAACTTCACCAGAATCTGAAGAACAAGATCATGAAGCTGTGAATTTAGAAGGAAATGGTGTTTTAGTTATCAGACAAAGTAGTGAAGAAAGCTCAAAGGTTGTAGATCCATCAAACCCTTCTTCCCATACTGCCACTGAGGAACCCTGA 2313 0.4237 MSTTTMLESLACCQSFKGYDLTKKKSPGYSHAISRVYRNSIFMLYSVNKQVPLLPHGASHGIFHRTCLSENFFKRSPLNVSSWKGLYRPRWERLQTNVAYDVAGAVDVINDLGLDTLTFLAVTVLIVPTFKSLKASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFVMGLAQVVLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAERGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNITEGSIWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLLTQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVTASETVNFNVSEPVVILGFGQMGQVLANFLSNPLASGGDSNEVGWPYVAFDLDPSVVKAARKTGFPVLYGDGSRSDVLHSAGVNSPKAIMIMYTGKKKTIEAVQRLRLNFPAVIISFPPLLSLQAPLSQLVIPIYTRARDLKHLLDLKKAGATDAILENAETSLHLGSKLLKGLGVMSDDVTFLSQLIRDSMELQAQEASDQSEDRGLDIMKPLQVRISDVREARVQAATTSPESEEQDHEAVNLEGNGVLVIRQSSEESSKVVDPSNPSSHTATEEP 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2022 770 Gene3D - 111 505 IPR038770 -
Aed10g2022 770 Gene3D - 506 692 - -
Aed10g2022 770 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 87 495 - -
Aed10g2022 770 ProSiteProfiles RCK N-terminal domain profile. 505 607 IPR003148 GO:0006813
Aed10g2022 770 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 624 729 - -
Aed10g2022 770 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 624 729 - -
Aed10g2022 770 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 495 607 - -
Aed10g2022 770 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 87 495 - -
Aed10g2022 770 Pfam TrkA-N domain 506 647 IPR003148 GO:0006813
Aed10g2022 770 MobiDBLite consensus disorder prediction 717 770 - -
Aed10g2022 770 Pfam Sodium/hydrogen exchanger family 118 495 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed10g2022 770 MobiDBLite consensus disorder prediction 742 770 - -
Aed10g2022 770 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 495 607 - -
Aed10g2022 770 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 504 667 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2022 Aed-Chr10 24192338 24201216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2022 1 722 Inorganic Solute Cotransporters AT4G04850 69.221 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2022 - - gmx:100798214 1289.25