Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2001 ATGGAACCCTCCAAAAAATTCCATGAATCATTTAAGGAAGGTTTTGTACCTGGGTATGTCTTTGTTACAACTTTTTTCATAATCATTTGTATATCCTATTGGCTACCTCCACTGGCACAACTTGTCAAGAGCAGGAAAGCAAATCAGAAGCGTAAATTGTCACATGAGGTTGATGACAGGTTAAAACAAGAAAAAATCAAAGAGGCAAAACGAAAGAGAGCTAGACGAATGAAAAAAGAGCTACCTATGGAGTTGCTAGAGAGAAGAATACAGATCTATGAAGTTGGATGGTTGAGTTGTACATCGAGTTTCACAAAACTCTGTGATGCAACCGAACACTTCAGCGAGGGCAGTGCCATTGGTGTGGGAAGGACTGGGATAATGTACAAGGCAACACTTCCCAATGGTTATTTAGTGGCAGTTAAGAGACTCTATGATTCTGAGTTGCTTATGCAAAGGTTCAAGATAGAAATAACAATGGGTCGGTACAGCCACAGAAACATAATCCCCCCCATCGGTTACTACATAGACAGAGAAAAAAAAGAAAGAATTTTGGTGTATCGATACATGTCAAAAGGAAAACTTTCCGATTGGTTGAATGATACCACCACAACATTAGGTTGGACAGCGGTTATTAGAATTGCATTAGGTGTTGCAAGAGGTTTATCTTGCCTTCATCATAGCTTGCACGTGATTCATCACTGCATTGCCTCCGAGAGTATCTTGTTAGGAAACAATTTTGAACCCAGAATATCCAATTTTGGAAGGGCCATATTTATAAACTATGATCTAAGCAAAAGCTTTGGATTTAAGAAGGATGTGTACGACTTTGGAACTTTACTTTTTAAGTTGATTGGGGGGAGGACATTTGGCAAAACGAGTAAATGTTTTAGCAATACTAACAATAATGGTCCTTTTGCAACTTACACATATGCTACTAATATGTTCGAGGACCCTTTTGGGTTCTATGAGGCAGTGGATAAATCTCTAAACGAGATTGAATTTGAAGATGAGGTTTCTGCTTTGCTCAGAGTTGCATGTGACTGTGTTCATCCTTTTCCTCATAAAAGGCCAACCATGCTTGAAGTGTATAGTAAGATGAGCAACGTATGGGAGAGAGATGTCATTTTTTAG 1134 0.3889 MEPSKKFHESFKEGFVPGYVFVTTFFIIICISYWLPPLAQLVKSRKANQKRKLSHEVDDRLKQEKIKEAKRKRARRMKKELPMELLERRIQIYEVGWLSCTSSFTKLCDATEHFSEGSAIGVGRTGIMYKATLPNGYLVAVKRLYDSELLMQRFKIEITMGRYSHRNIIPPIGYYIDREKKERILVYRYMSKGKLSDWLNDTTTTLGWTAVIRIALGVARGLSCLHHSLHVIHHCIASESILLGNNFEPRISNFGRAIFINYDLSKSFGFKKDVYDFGTLLFKLIGGRTFGKTSKCFSNTNNNGPFATYTYATNMFEDPFGFYEAVDKSLNEIEFEDEVSALLRVACDCVHPFPHKRPTMLEVYSKMSNVWERDVIF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2001 377 Pfam Protein tyrosine and serine/threonine kinase 117 260 IPR001245 GO:0004672|GO:0006468
Aed10g2001 377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 374 - -
Aed10g2001 377 ProSiteProfiles Protein kinase domain profile. 114 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g2001 377 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 20 374 - -
Aed10g2001 377 Gene3D Transferase(Phosphotransferase) domain 1 190 375 - -
Aed10g2001 377 Gene3D Phosphorylase Kinase; domain 1 52 189 - -
Aed10g2001 377 SUPERFAMILY Protein kinase-like (PK-like) 98 365 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2001 Aed-Chr10 24056071 24062121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g2001 45 370 Receptor kinase-like Gene Family AT5G07280 29.462 1.86e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed10g2001 PK_Tyr_Ser-Thr 7.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2001 - - gmx:102663800 507.679