Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1993 ATGAACTGGCCTGCCTTGACTTTCACAATAGGAATTTGCATAGGCTTTGTGGTTGGGGTGTGTTTGTCATTATCGATTATATTCTGCTTCATATGTGGAAGAAAGCGCACAACGATTGATAGGACCAGTTCTCAAAGTGCAGTGACCATTCCTGTTCAGGTCCAAAGGGTTGAGTCCAACTCAATCTTATCAGATGGTCAGGAATCACCCAGAACATCTGAGTGGAGTAACACACCTTTTTGGTTGGAAAGACTTAGGAGGAAGAGTGCAGTGTCAGCATGTGGATTTCCCAAGTATTCTTACAAGTATGTTAACTTTTTGTTGCACTGTTCTTTCCTGCTTTTAGATATACAAAAGGCTACTTCTGATTTCACAACCATCATAGGCAATGGAGCATTTGGTCCTGTTTATAAAGCGCAGATGGATACAGGCGAGACAGTTGCAGTTAAAGTCCTTGGTAGTAATTCAAGGCAAGGAGAACAGGAATTTTTAACTGAGGTTTTATTACTTGGAAGATTACATCACAAAAGCCTTGTGGATTTGGTGGGATATGTGGCAGAAAGAGGAAAACACATGCTTCTTTTCATTTACATGAGCAATGGCAGTCTTGATTCCCATTTATATGATGATGTTGCAGTTTTGCTTTTTCATCATATCCCTTCACATCTATATTTGACTGAGCAGGCAGCCATGGAAGGTGAGGGTAAGGTTGGATGGGAAGAAATTGTGGACTCGCAAATAAATGGAAAATACAATGTGCATAATCTTCATGACATGGCTTCACTTGCATTCAAATGTGTTAATGAAGTTTCCAAAAGCCGACCTTCAATGCGTGACATTGTTCAAGAATTATCTCAGATTTGTAAGAGGCATAGTAAAAATCATGGTGGCACATTTCCTGCTGAATTGAAGCAAGTGTCCATTGAAGTGGACCAGCTTGAAACTCAGGACTTTTCCTCAATTGAGAGTTCAAAGATGCTGCGGAGATTGCATAGCCGATGA 1002 0.4052 MNWPALTFTIGICIGFVVGVCLSLSIIFCFICGRKRTTIDRTSSQSAVTIPVQVQRVESNSILSDGQESPRTSEWSNTPFWLERLRRKSAVSACGFPKYSYKYVNFLLHCSFLLLDIQKATSDFTTIIGNGAFGPVYKAQMDTGETVAVKVLGSNSRQGEQEFLTEVLLLGRLHHKSLVDLVGYVAERGKHMLLFIYMSNGSLDSHLYDDVAVLLFHHIPSHLYLTEQAAMEGEGKVGWEEIVDSQINGKYNVHNLHDMASLAFKCVNEVSKSRPSMRDIVQELSQICKRHSKNHGGTFPAELKQVSIEVDQLETQDFSSIESSKMLRRLHSR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1993 333 Pfam Protein tyrosine and serine/threonine kinase 125 210 IPR001245 GO:0004672|GO:0006468
Aed10g1993 333 SUPERFAMILY Protein kinase-like (PK-like) 98 213 IPR011009 -
Aed10g1993 333 Gene3D Transferase(Phosphotransferase) domain 1 214 304 - -
Aed10g1993 333 Gene3D Transferase(Phosphotransferase) domain 1 101 213 - -
Aed10g1993 333 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 228 318 - -
Aed10g1993 333 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 2 215 - -
Aed10g1993 333 PANTHER OS01G0253100 PROTEIN 228 318 IPR045271 GO:0004714|GO:0006468
Aed10g1993 333 PANTHER OS01G0253100 PROTEIN 2 215 IPR045271 GO:0004714|GO:0006468
Aed10g1993 333 ProSiteProfiles Protein kinase domain profile. 122 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1993 Aed-Chr10 24016058 24020261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1993 10 208 Receptor kinase-like Gene Family AT2G37050 34.158 1.72e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Aed10g1993 PK_Tyr_Ser-Thr 3.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1993 - - gmx:100816549 337.035